Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28134 | 84625;84626;84627 | chr2:178561732;178561731;178561730 | chr2:179426459;179426458;179426457 |
N2AB | 26493 | 79702;79703;79704 | chr2:178561732;178561731;178561730 | chr2:179426459;179426458;179426457 |
N2A | 25566 | 76921;76922;76923 | chr2:178561732;178561731;178561730 | chr2:179426459;179426458;179426457 |
N2B | 19069 | 57430;57431;57432 | chr2:178561732;178561731;178561730 | chr2:179426459;179426458;179426457 |
Novex-1 | 19194 | 57805;57806;57807 | chr2:178561732;178561731;178561730 | chr2:179426459;179426458;179426457 |
Novex-2 | 19261 | 58006;58007;58008 | chr2:178561732;178561731;178561730 | chr2:179426459;179426458;179426457 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs771002170 | 0.011 | 1.0 | N | 0.651 | 0.424 | 0.608144913684 | gnomAD-2.1.1 | 3.94E-05 | None | None | None | None | I | None | 8.27E-05 | 1.98615E-04 | None | 9.72E-05 | 0 | None | 0 | None | 0 | 0 | 1.41163E-04 |
R/C | rs771002170 | 0.011 | 1.0 | N | 0.651 | 0.424 | 0.608144913684 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 2.41E-05 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/C | rs771002170 | 0.011 | 1.0 | N | 0.651 | 0.424 | 0.608144913684 | gnomAD-4.0.0 | 1.67469E-05 | None | None | None | None | I | None | 2.6738E-05 | 1.50311E-04 | None | 3.38203E-05 | 2.23354E-05 | None | 1.56436E-05 | 0 | 5.93767E-06 | 2.19746E-05 | 6.41169E-05 |
R/H | rs777785413 | -0.656 | 0.997 | N | 0.514 | 0.398 | 0.299427821978 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 3.29E-05 | None | 4.68E-05 | 0 | 0 |
R/H | rs777785413 | -0.656 | 0.997 | N | 0.514 | 0.398 | 0.299427821978 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/H | rs777785413 | -0.656 | 0.997 | N | 0.514 | 0.398 | 0.299427821978 | gnomAD-4.0.0 | 6.82345E-06 | None | None | None | None | I | None | 1.33633E-05 | 3.34124E-05 | None | 0 | 0 | None | 1.56411E-05 | 0 | 3.3932E-06 | 2.19891E-05 | 1.60282E-05 |
R/L | rs777785413 | 0.581 | 0.954 | N | 0.483 | 0.417 | 0.481543764896 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
R/L | rs777785413 | 0.581 | 0.954 | N | 0.483 | 0.417 | 0.481543764896 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/L | rs777785413 | 0.581 | 0.954 | N | 0.483 | 0.417 | 0.481543764896 | gnomAD-4.0.0 | 5.58282E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.7864E-06 | 0 | 1.60282E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9347 | likely_pathogenic | 0.9344 | pathogenic | 0.086 | Stabilizing | 0.916 | D | 0.57 | neutral | None | None | None | None | I |
R/C | 0.5938 | likely_pathogenic | 0.7922 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.651 | neutral | N | 0.50702109 | None | None | I |
R/D | 0.9829 | likely_pathogenic | 0.9839 | pathogenic | -0.231 | Destabilizing | 0.975 | D | 0.472 | neutral | None | None | None | None | I |
R/E | 0.9256 | likely_pathogenic | 0.9335 | pathogenic | -0.163 | Destabilizing | 0.845 | D | 0.536 | neutral | None | None | None | None | I |
R/F | 0.9532 | likely_pathogenic | 0.9673 | pathogenic | -0.191 | Destabilizing | 0.996 | D | 0.587 | neutral | None | None | None | None | I |
R/G | 0.9097 | likely_pathogenic | 0.9192 | pathogenic | -0.093 | Destabilizing | 0.954 | D | 0.483 | neutral | N | 0.464168946 | None | None | I |
R/H | 0.434 | ambiguous | 0.4877 | ambiguous | -0.825 | Destabilizing | 0.997 | D | 0.514 | neutral | N | 0.481661906 | None | None | I |
R/I | 0.7556 | likely_pathogenic | 0.7898 | pathogenic | 0.517 | Stabilizing | 0.987 | D | 0.587 | neutral | None | None | None | None | I |
R/K | 0.3392 | likely_benign | 0.3568 | ambiguous | -0.016 | Destabilizing | 0.693 | D | 0.49 | neutral | None | None | None | None | I |
R/L | 0.7585 | likely_pathogenic | 0.779 | pathogenic | 0.517 | Stabilizing | 0.954 | D | 0.483 | neutral | N | 0.52119382 | None | None | I |
R/M | 0.8495 | likely_pathogenic | 0.882 | pathogenic | -0.023 | Destabilizing | 0.997 | D | 0.513 | neutral | None | None | None | None | I |
R/N | 0.9611 | likely_pathogenic | 0.9651 | pathogenic | 0.079 | Stabilizing | 0.975 | D | 0.494 | neutral | None | None | None | None | I |
R/P | 0.9434 | likely_pathogenic | 0.9389 | pathogenic | 0.393 | Stabilizing | 0.993 | D | 0.553 | neutral | N | 0.519308308 | None | None | I |
R/Q | 0.4214 | ambiguous | 0.45 | ambiguous | 0.068 | Stabilizing | 0.253 | N | 0.448 | neutral | None | None | None | None | I |
R/S | 0.9559 | likely_pathogenic | 0.9606 | pathogenic | -0.109 | Destabilizing | 0.954 | D | 0.542 | neutral | N | 0.497354168 | None | None | I |
R/T | 0.8879 | likely_pathogenic | 0.8997 | pathogenic | 0.089 | Stabilizing | 0.975 | D | 0.5 | neutral | None | None | None | None | I |
R/V | 0.8757 | likely_pathogenic | 0.8883 | pathogenic | 0.393 | Stabilizing | 0.975 | D | 0.577 | neutral | None | None | None | None | I |
R/W | 0.6178 | likely_pathogenic | 0.719 | pathogenic | -0.363 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
R/Y | 0.8475 | likely_pathogenic | 0.8846 | pathogenic | 0.064 | Stabilizing | 0.996 | D | 0.562 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.