Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28143 | 84652;84653;84654 | chr2:178561705;178561704;178561703 | chr2:179426432;179426431;179426430 |
N2AB | 26502 | 79729;79730;79731 | chr2:178561705;178561704;178561703 | chr2:179426432;179426431;179426430 |
N2A | 25575 | 76948;76949;76950 | chr2:178561705;178561704;178561703 | chr2:179426432;179426431;179426430 |
N2B | 19078 | 57457;57458;57459 | chr2:178561705;178561704;178561703 | chr2:179426432;179426431;179426430 |
Novex-1 | 19203 | 57832;57833;57834 | chr2:178561705;178561704;178561703 | chr2:179426432;179426431;179426430 |
Novex-2 | 19270 | 58033;58034;58035 | chr2:178561705;178561704;178561703 | chr2:179426432;179426431;179426430 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs878971321 | None | 0.981 | N | 0.789 | 0.404 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/F | rs878971321 | None | 0.981 | N | 0.789 | 0.404 | None | gnomAD-4.0.0 | 6.57039E-06 | None | None | None | None | N | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3945 | ambiguous | 0.3723 | ambiguous | -0.871 | Destabilizing | 0.595 | D | 0.473 | neutral | N | 0.51245412 | None | None | N |
S/C | 0.3907 | ambiguous | 0.3934 | ambiguous | -0.624 | Destabilizing | 0.998 | D | 0.674 | prob.neutral | N | 0.501559679 | None | None | N |
S/D | 0.9412 | likely_pathogenic | 0.9335 | pathogenic | -0.185 | Destabilizing | 0.904 | D | 0.595 | neutral | None | None | None | None | N |
S/E | 0.9836 | likely_pathogenic | 0.9818 | pathogenic | -0.112 | Destabilizing | 0.904 | D | 0.603 | neutral | None | None | None | None | N |
S/F | 0.9087 | likely_pathogenic | 0.8981 | pathogenic | -0.885 | Destabilizing | 0.981 | D | 0.789 | deleterious | N | 0.486720654 | None | None | N |
S/G | 0.3555 | ambiguous | 0.3743 | ambiguous | -1.182 | Destabilizing | 0.904 | D | 0.544 | neutral | None | None | None | None | N |
S/H | 0.9493 | likely_pathogenic | 0.9461 | pathogenic | -1.49 | Destabilizing | 0.999 | D | 0.656 | prob.neutral | None | None | None | None | N |
S/I | 0.8208 | likely_pathogenic | 0.7945 | pathogenic | -0.128 | Destabilizing | 0.971 | D | 0.738 | deleterious | None | None | None | None | N |
S/K | 0.9958 | likely_pathogenic | 0.995 | pathogenic | -0.37 | Destabilizing | 0.904 | D | 0.597 | neutral | None | None | None | None | N |
S/L | 0.628 | likely_pathogenic | 0.6215 | pathogenic | -0.128 | Destabilizing | 0.825 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/M | 0.7087 | likely_pathogenic | 0.6774 | pathogenic | -0.083 | Destabilizing | 0.999 | D | 0.651 | prob.neutral | None | None | None | None | N |
S/N | 0.7923 | likely_pathogenic | 0.7881 | pathogenic | -0.557 | Destabilizing | 0.904 | D | 0.606 | neutral | None | None | None | None | N |
S/P | 0.9748 | likely_pathogenic | 0.9772 | pathogenic | -0.341 | Destabilizing | 0.981 | D | 0.653 | prob.neutral | N | 0.455771331 | None | None | N |
S/Q | 0.9778 | likely_pathogenic | 0.9749 | pathogenic | -0.58 | Destabilizing | 0.985 | D | 0.616 | neutral | None | None | None | None | N |
S/R | 0.9949 | likely_pathogenic | 0.995 | pathogenic | -0.444 | Destabilizing | 0.971 | D | 0.645 | neutral | None | None | None | None | N |
S/T | 0.1428 | likely_benign | 0.1397 | benign | -0.55 | Destabilizing | 0.087 | N | 0.356 | neutral | N | 0.505373432 | None | None | N |
S/V | 0.7732 | likely_pathogenic | 0.746 | pathogenic | -0.341 | Destabilizing | 0.943 | D | 0.7 | prob.delet. | None | None | None | None | N |
S/W | 0.9481 | likely_pathogenic | 0.9467 | pathogenic | -0.856 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
S/Y | 0.882 | likely_pathogenic | 0.8785 | pathogenic | -0.541 | Destabilizing | 0.994 | D | 0.794 | deleterious | N | 0.518396487 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.