Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2816 | 8671;8672;8673 | chr2:178770255;178770254;178770253 | chr2:179634982;179634981;179634980 |
N2AB | 2816 | 8671;8672;8673 | chr2:178770255;178770254;178770253 | chr2:179634982;179634981;179634980 |
N2A | 2816 | 8671;8672;8673 | chr2:178770255;178770254;178770253 | chr2:179634982;179634981;179634980 |
N2B | 2770 | 8533;8534;8535 | chr2:178770255;178770254;178770253 | chr2:179634982;179634981;179634980 |
Novex-1 | 2770 | 8533;8534;8535 | chr2:178770255;178770254;178770253 | chr2:179634982;179634981;179634980 |
Novex-2 | 2770 | 8533;8534;8535 | chr2:178770255;178770254;178770253 | chr2:179634982;179634981;179634980 |
Novex-3 | 2816 | 8671;8672;8673 | chr2:178770255;178770254;178770253 | chr2:179634982;179634981;179634980 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.012 | N | 0.443 | 0.131 | 0.295623431141 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7461 | likely_pathogenic | 0.7819 | pathogenic | -2.585 | Highly Destabilizing | 0.625 | D | 0.701 | prob.neutral | N | 0.449171149 | None | None | N |
V/C | 0.912 | likely_pathogenic | 0.9238 | pathogenic | -2.095 | Highly Destabilizing | 0.998 | D | 0.826 | deleterious | None | None | None | None | N |
V/D | 0.9955 | likely_pathogenic | 0.9948 | pathogenic | -3.496 | Highly Destabilizing | 0.989 | D | 0.871 | deleterious | N | 0.479340283 | None | None | N |
V/E | 0.99 | likely_pathogenic | 0.989 | pathogenic | -3.232 | Highly Destabilizing | 0.991 | D | 0.835 | deleterious | None | None | None | None | N |
V/F | 0.6923 | likely_pathogenic | 0.7286 | pathogenic | -1.431 | Destabilizing | 0.934 | D | 0.829 | deleterious | N | 0.461411232 | None | None | N |
V/G | 0.8739 | likely_pathogenic | 0.8558 | pathogenic | -3.112 | Highly Destabilizing | 0.966 | D | 0.844 | deleterious | N | 0.454024293 | None | None | N |
V/H | 0.9977 | likely_pathogenic | 0.9975 | pathogenic | -2.865 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
V/I | 0.1127 | likely_benign | 0.1359 | benign | -1.05 | Destabilizing | 0.012 | N | 0.443 | neutral | N | 0.445770683 | None | None | N |
V/K | 0.9964 | likely_pathogenic | 0.9956 | pathogenic | -2.233 | Highly Destabilizing | 0.974 | D | 0.837 | deleterious | None | None | None | None | N |
V/L | 0.3268 | likely_benign | 0.3604 | ambiguous | -1.05 | Destabilizing | 0.005 | N | 0.393 | neutral | N | 0.442256006 | None | None | N |
V/M | 0.3943 | ambiguous | 0.435 | ambiguous | -1.212 | Destabilizing | 0.172 | N | 0.501 | neutral | None | None | None | None | N |
V/N | 0.9842 | likely_pathogenic | 0.9839 | pathogenic | -2.729 | Highly Destabilizing | 0.991 | D | 0.87 | deleterious | None | None | None | None | N |
V/P | 0.9986 | likely_pathogenic | 0.9983 | pathogenic | -1.546 | Destabilizing | 0.991 | D | 0.855 | deleterious | None | None | None | None | N |
V/Q | 0.9919 | likely_pathogenic | 0.9916 | pathogenic | -2.48 | Highly Destabilizing | 0.974 | D | 0.854 | deleterious | None | None | None | None | N |
V/R | 0.9942 | likely_pathogenic | 0.9932 | pathogenic | -2.073 | Highly Destabilizing | 0.974 | D | 0.871 | deleterious | None | None | None | None | N |
V/S | 0.9448 | likely_pathogenic | 0.9535 | pathogenic | -3.243 | Highly Destabilizing | 0.915 | D | 0.822 | deleterious | None | None | None | None | N |
V/T | 0.8157 | likely_pathogenic | 0.8292 | pathogenic | -2.856 | Highly Destabilizing | 0.842 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/W | 0.9968 | likely_pathogenic | 0.9971 | pathogenic | -2.043 | Highly Destabilizing | 0.998 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.9785 | likely_pathogenic | 0.9804 | pathogenic | -1.79 | Destabilizing | 0.974 | D | 0.826 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.