Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28164 | 84715;84716;84717 | chr2:178561642;178561641;178561640 | chr2:179426369;179426368;179426367 |
N2AB | 26523 | 79792;79793;79794 | chr2:178561642;178561641;178561640 | chr2:179426369;179426368;179426367 |
N2A | 25596 | 77011;77012;77013 | chr2:178561642;178561641;178561640 | chr2:179426369;179426368;179426367 |
N2B | 19099 | 57520;57521;57522 | chr2:178561642;178561641;178561640 | chr2:179426369;179426368;179426367 |
Novex-1 | 19224 | 57895;57896;57897 | chr2:178561642;178561641;178561640 | chr2:179426369;179426368;179426367 |
Novex-2 | 19291 | 58096;58097;58098 | chr2:178561642;178561641;178561640 | chr2:179426369;179426368;179426367 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs1703698768 | None | 0.101 | N | 0.407 | 0.134 | 0.589461000006 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.21507E-04 | 0 |
V/L | None | None | 0.001 | N | 0.088 | 0.051 | 0.251639045875 | gnomAD-4.0.0 | 1.60036E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.42836E-04 | 0 | 0 | 0 |
V/M | None | None | 0.017 | N | 0.231 | 0.058 | 0.302793454619 | gnomAD-4.0.0 | 1.60036E-06 | None | None | None | None | N | None | 0 | 2.3033E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0995 | likely_benign | 0.0893 | benign | -0.706 | Destabilizing | 0.001 | N | 0.083 | neutral | N | 0.454603469 | None | None | N |
V/C | 0.5199 | ambiguous | 0.4814 | ambiguous | -0.604 | Destabilizing | 0.94 | D | 0.372 | neutral | None | None | None | None | N |
V/D | 0.2413 | likely_benign | 0.2024 | benign | -0.557 | Destabilizing | 0.418 | N | 0.431 | neutral | None | None | None | None | N |
V/E | 0.1859 | likely_benign | 0.1564 | benign | -0.633 | Destabilizing | 0.351 | N | 0.384 | neutral | N | 0.478613692 | None | None | N |
V/F | 0.1249 | likely_benign | 0.1142 | benign | -0.717 | Destabilizing | 0.716 | D | 0.453 | neutral | None | None | None | None | N |
V/G | 0.1364 | likely_benign | 0.1214 | benign | -0.898 | Destabilizing | 0.101 | N | 0.407 | neutral | N | 0.511496901 | None | None | N |
V/H | 0.352 | ambiguous | 0.3061 | benign | -0.392 | Destabilizing | 0.983 | D | 0.365 | neutral | None | None | None | None | N |
V/I | 0.0685 | likely_benign | 0.0674 | benign | -0.325 | Destabilizing | 0.129 | N | 0.333 | neutral | None | None | None | None | N |
V/K | 0.2178 | likely_benign | 0.1799 | benign | -0.676 | Destabilizing | 0.418 | N | 0.382 | neutral | None | None | None | None | N |
V/L | 0.1162 | likely_benign | 0.1024 | benign | -0.325 | Destabilizing | 0.001 | N | 0.088 | neutral | N | 0.45685434 | None | None | N |
V/M | 0.099 | likely_benign | 0.0905 | benign | -0.379 | Destabilizing | 0.017 | N | 0.231 | neutral | N | 0.495162012 | None | None | N |
V/N | 0.162 | likely_benign | 0.1423 | benign | -0.418 | Destabilizing | 0.418 | N | 0.456 | neutral | None | None | None | None | N |
V/P | 0.6625 | likely_pathogenic | 0.5648 | pathogenic | -0.416 | Destabilizing | 0.836 | D | 0.44 | neutral | None | None | None | None | N |
V/Q | 0.1901 | likely_benign | 0.1621 | benign | -0.633 | Destabilizing | 0.836 | D | 0.427 | neutral | None | None | None | None | N |
V/R | 0.2071 | likely_benign | 0.1731 | benign | -0.13 | Destabilizing | 0.716 | D | 0.446 | neutral | None | None | None | None | N |
V/S | 0.1094 | likely_benign | 0.1002 | benign | -0.797 | Destabilizing | 0.012 | N | 0.223 | neutral | None | None | None | None | N |
V/T | 0.0953 | likely_benign | 0.0868 | benign | -0.77 | Destabilizing | 0.002 | N | 0.119 | neutral | None | None | None | None | N |
V/W | 0.6305 | likely_pathogenic | 0.5733 | pathogenic | -0.837 | Destabilizing | 0.983 | D | 0.398 | neutral | None | None | None | None | N |
V/Y | 0.3395 | likely_benign | 0.2978 | benign | -0.544 | Destabilizing | 0.836 | D | 0.396 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.