Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28165 | 84718;84719;84720 | chr2:178561639;178561638;178561637 | chr2:179426366;179426365;179426364 |
N2AB | 26524 | 79795;79796;79797 | chr2:178561639;178561638;178561637 | chr2:179426366;179426365;179426364 |
N2A | 25597 | 77014;77015;77016 | chr2:178561639;178561638;178561637 | chr2:179426366;179426365;179426364 |
N2B | 19100 | 57523;57524;57525 | chr2:178561639;178561638;178561637 | chr2:179426366;179426365;179426364 |
Novex-1 | 19225 | 57898;57899;57900 | chr2:178561639;178561638;178561637 | chr2:179426366;179426365;179426364 |
Novex-2 | 19292 | 58099;58100;58101 | chr2:178561639;178561638;178561637 | chr2:179426366;179426365;179426364 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs1472903597 | -0.128 | 0.549 | N | 0.325 | 0.309 | 0.141422826196 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/D | rs1472903597 | -0.128 | 0.549 | N | 0.325 | 0.309 | 0.141422826196 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/D | rs1472903597 | -0.128 | 0.549 | N | 0.325 | 0.309 | 0.141422826196 | gnomAD-4.0.0 | 1.24146E-06 | None | None | None | None | N | None | 2.67308E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/R | rs876658088 | None | 0.379 | N | 0.217 | 0.161 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
H/R | rs876658088 | None | 0.379 | N | 0.217 | 0.161 | None | gnomAD-4.0.0 | 1.42753E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.95149E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2038 | likely_benign | 0.1808 | benign | 0.193 | Stabilizing | 0.25 | N | 0.335 | neutral | None | None | None | None | N |
H/C | 0.1634 | likely_benign | 0.1456 | benign | 0.526 | Stabilizing | 0.992 | D | 0.418 | neutral | None | None | None | None | N |
H/D | 0.206 | likely_benign | 0.1796 | benign | -0.057 | Destabilizing | 0.549 | D | 0.325 | neutral | N | 0.407289524 | None | None | N |
H/E | 0.2285 | likely_benign | 0.2083 | benign | -0.028 | Destabilizing | 0.25 | N | 0.221 | neutral | None | None | None | None | N |
H/F | 0.2174 | likely_benign | 0.2094 | benign | 0.913 | Stabilizing | 0.739 | D | 0.332 | neutral | None | None | None | None | N |
H/G | 0.2794 | likely_benign | 0.2359 | benign | -0.086 | Destabilizing | 0.617 | D | 0.359 | neutral | None | None | None | None | N |
H/I | 0.2454 | likely_benign | 0.2275 | benign | 0.905 | Stabilizing | 0.739 | D | 0.429 | neutral | None | None | None | None | N |
H/K | 0.2263 | likely_benign | 0.2079 | benign | 0.112 | Stabilizing | 0.005 | N | 0.132 | neutral | None | None | None | None | N |
H/L | 0.1066 | likely_benign | 0.0964 | benign | 0.905 | Stabilizing | 0.004 | N | 0.223 | neutral | N | 0.449312292 | None | None | N |
H/M | 0.3111 | likely_benign | 0.3009 | benign | 0.627 | Stabilizing | 0.85 | D | 0.405 | neutral | None | None | None | None | N |
H/N | 0.0959 | likely_benign | 0.0878 | benign | 0.035 | Stabilizing | 0.549 | D | 0.239 | neutral | N | 0.39203207 | None | None | N |
H/P | 0.5812 | likely_pathogenic | 0.5126 | ambiguous | 0.692 | Stabilizing | 0.896 | D | 0.395 | neutral | N | 0.478170975 | None | None | N |
H/Q | 0.1354 | likely_benign | 0.1238 | benign | 0.153 | Stabilizing | 0.016 | N | 0.162 | neutral | N | 0.457507701 | None | None | N |
H/R | 0.1181 | likely_benign | 0.1027 | benign | -0.434 | Destabilizing | 0.379 | N | 0.217 | neutral | N | 0.438479223 | None | None | N |
H/S | 0.1606 | likely_benign | 0.1432 | benign | 0.107 | Stabilizing | 0.447 | N | 0.286 | neutral | None | None | None | None | N |
H/T | 0.1961 | likely_benign | 0.1779 | benign | 0.238 | Stabilizing | 0.617 | D | 0.402 | neutral | None | None | None | None | N |
H/V | 0.1984 | likely_benign | 0.1814 | benign | 0.692 | Stabilizing | 0.447 | N | 0.411 | neutral | None | None | None | None | N |
H/W | 0.3359 | likely_benign | 0.3113 | benign | 0.926 | Stabilizing | 0.992 | D | 0.439 | neutral | None | None | None | None | N |
H/Y | 0.0844 | likely_benign | 0.0794 | benign | 1.168 | Stabilizing | 0.712 | D | 0.31 | neutral | N | 0.489985479 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.