Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28179 | 84760;84761;84762 | chr2:178561597;178561596;178561595 | chr2:179426324;179426323;179426322 |
N2AB | 26538 | 79837;79838;79839 | chr2:178561597;178561596;178561595 | chr2:179426324;179426323;179426322 |
N2A | 25611 | 77056;77057;77058 | chr2:178561597;178561596;178561595 | chr2:179426324;179426323;179426322 |
N2B | 19114 | 57565;57566;57567 | chr2:178561597;178561596;178561595 | chr2:179426324;179426323;179426322 |
Novex-1 | 19239 | 57940;57941;57942 | chr2:178561597;178561596;178561595 | chr2:179426324;179426323;179426322 |
Novex-2 | 19306 | 58141;58142;58143 | chr2:178561597;178561596;178561595 | chr2:179426324;179426323;179426322 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.645 | N | 0.449 | 0.166 | 0.399889258716 | gnomAD-4.0.0 | 1.36898E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99654E-07 | 0 | 1.65717E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3041 | likely_benign | 0.3013 | benign | -0.316 | Destabilizing | 0.012 | N | 0.109 | neutral | N | 0.43293733 | None | None | I |
V/C | 0.7831 | likely_pathogenic | 0.7922 | pathogenic | -0.706 | Destabilizing | 0.996 | D | 0.376 | neutral | None | None | None | None | I |
V/D | 0.6221 | likely_pathogenic | 0.6149 | pathogenic | -0.412 | Destabilizing | 0.521 | D | 0.443 | neutral | N | 0.488945329 | None | None | I |
V/E | 0.5149 | ambiguous | 0.5009 | ambiguous | -0.537 | Destabilizing | 0.009 | N | 0.252 | neutral | None | None | None | None | I |
V/F | 0.3203 | likely_benign | 0.3197 | benign | -0.695 | Destabilizing | 0.979 | D | 0.389 | neutral | N | 0.482849994 | None | None | I |
V/G | 0.3128 | likely_benign | 0.3251 | benign | -0.386 | Destabilizing | 0.521 | D | 0.442 | neutral | N | 0.489081402 | None | None | I |
V/H | 0.7493 | likely_pathogenic | 0.7412 | pathogenic | -0.015 | Destabilizing | 0.987 | D | 0.391 | neutral | None | None | None | None | I |
V/I | 0.0937 | likely_benign | 0.0909 | benign | -0.28 | Destabilizing | 0.645 | D | 0.449 | neutral | N | 0.464916463 | None | None | I |
V/K | 0.5837 | likely_pathogenic | 0.5613 | ambiguous | -0.394 | Destabilizing | 0.59 | D | 0.462 | neutral | None | None | None | None | I |
V/L | 0.2713 | likely_benign | 0.2566 | benign | -0.28 | Destabilizing | 0.472 | N | 0.485 | neutral | N | 0.477882973 | None | None | I |
V/M | 0.2231 | likely_benign | 0.2223 | benign | -0.487 | Destabilizing | 0.984 | D | 0.42 | neutral | None | None | None | None | I |
V/N | 0.446 | ambiguous | 0.4551 | ambiguous | -0.158 | Destabilizing | 0.91 | D | 0.437 | neutral | None | None | None | None | I |
V/P | 0.603 | likely_pathogenic | 0.6087 | pathogenic | -0.262 | Destabilizing | 0.953 | D | 0.418 | neutral | None | None | None | None | I |
V/Q | 0.4866 | ambiguous | 0.4868 | ambiguous | -0.399 | Destabilizing | 0.835 | D | 0.43 | neutral | None | None | None | None | I |
V/R | 0.5006 | ambiguous | 0.4866 | ambiguous | 0.087 | Stabilizing | 0.91 | D | 0.437 | neutral | None | None | None | None | I |
V/S | 0.3391 | likely_benign | 0.3458 | ambiguous | -0.443 | Destabilizing | 0.59 | D | 0.425 | neutral | None | None | None | None | I |
V/T | 0.3382 | likely_benign | 0.3431 | ambiguous | -0.477 | Destabilizing | 0.742 | D | 0.421 | neutral | None | None | None | None | I |
V/W | 0.8887 | likely_pathogenic | 0.8886 | pathogenic | -0.763 | Destabilizing | 0.996 | D | 0.513 | neutral | None | None | None | None | I |
V/Y | 0.6862 | likely_pathogenic | 0.6816 | pathogenic | -0.476 | Destabilizing | 0.984 | D | 0.381 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.