Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28191 | 84796;84797;84798 | chr2:178561561;178561560;178561559 | chr2:179426288;179426287;179426286 |
N2AB | 26550 | 79873;79874;79875 | chr2:178561561;178561560;178561559 | chr2:179426288;179426287;179426286 |
N2A | 25623 | 77092;77093;77094 | chr2:178561561;178561560;178561559 | chr2:179426288;179426287;179426286 |
N2B | 19126 | 57601;57602;57603 | chr2:178561561;178561560;178561559 | chr2:179426288;179426287;179426286 |
Novex-1 | 19251 | 57976;57977;57978 | chr2:178561561;178561560;178561559 | chr2:179426288;179426287;179426286 |
Novex-2 | 19318 | 58177;58178;58179 | chr2:178561561;178561560;178561559 | chr2:179426288;179426287;179426286 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.999 | N | 0.895 | 0.65 | 0.853648971886 | gnomAD-4.0.0 | 1.59245E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78056E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9006 | likely_pathogenic | 0.8972 | pathogenic | -3.349 | Highly Destabilizing | 0.983 | D | 0.687 | prob.neutral | None | None | None | None | N |
L/C | 0.8842 | likely_pathogenic | 0.8877 | pathogenic | -2.487 | Highly Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -4.038 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
L/E | 0.9963 | likely_pathogenic | 0.9963 | pathogenic | -3.735 | Highly Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
L/F | 0.8012 | likely_pathogenic | 0.8065 | pathogenic | -2.11 | Highly Destabilizing | 0.997 | D | 0.67 | neutral | N | 0.517864552 | None | None | N |
L/G | 0.9918 | likely_pathogenic | 0.9917 | pathogenic | -3.898 | Highly Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
L/H | 0.9928 | likely_pathogenic | 0.9935 | pathogenic | -3.402 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | N | 0.518118041 | None | None | N |
L/I | 0.1131 | likely_benign | 0.1046 | benign | -1.664 | Destabilizing | 0.37 | N | 0.293 | neutral | N | 0.423064266 | None | None | N |
L/K | 0.9937 | likely_pathogenic | 0.9941 | pathogenic | -2.886 | Highly Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
L/M | 0.3005 | likely_benign | 0.3018 | benign | -1.761 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
L/N | 0.9974 | likely_pathogenic | 0.9973 | pathogenic | -3.609 | Highly Destabilizing | 0.999 | D | 0.897 | deleterious | None | None | None | None | N |
L/P | 0.9963 | likely_pathogenic | 0.9962 | pathogenic | -2.223 | Highly Destabilizing | 0.999 | D | 0.895 | deleterious | N | 0.518118041 | None | None | N |
L/Q | 0.9852 | likely_pathogenic | 0.986 | pathogenic | -3.295 | Highly Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
L/R | 0.9872 | likely_pathogenic | 0.9875 | pathogenic | -2.723 | Highly Destabilizing | 0.999 | D | 0.882 | deleterious | N | 0.518118041 | None | None | N |
L/S | 0.9903 | likely_pathogenic | 0.9907 | pathogenic | -4.088 | Highly Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
L/T | 0.9146 | likely_pathogenic | 0.9124 | pathogenic | -3.643 | Highly Destabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | N |
L/V | 0.1101 | likely_benign | 0.1029 | benign | -2.223 | Highly Destabilizing | 0.9 | D | 0.469 | neutral | N | 0.406262443 | None | None | N |
L/W | 0.9837 | likely_pathogenic | 0.9852 | pathogenic | -2.445 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/Y | 0.9863 | likely_pathogenic | 0.9869 | pathogenic | -2.377 | Highly Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.