Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2820084823;84824;84825 chr2:178561534;178561533;178561532chr2:179426261;179426260;179426259
N2AB2655979900;79901;79902 chr2:178561534;178561533;178561532chr2:179426261;179426260;179426259
N2A2563277119;77120;77121 chr2:178561534;178561533;178561532chr2:179426261;179426260;179426259
N2B1913557628;57629;57630 chr2:178561534;178561533;178561532chr2:179426261;179426260;179426259
Novex-11926058003;58004;58005 chr2:178561534;178561533;178561532chr2:179426261;179426260;179426259
Novex-21932758204;58205;58206 chr2:178561534;178561533;178561532chr2:179426261;179426260;179426259
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-93
  • Domain position: 47
  • Structural Position: 64
  • Q(SASA): 0.6183
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs769081825 -0.52 0.998 N 0.614 0.324 0.558227216974 gnomAD-2.1.1 4.03E-06 None None None None I None 0 0 None 0 0 None 0 None 0 8.89E-06 0
L/F rs769081825 -0.52 0.998 N 0.614 0.324 0.558227216974 gnomAD-4.0.0 6.84426E-07 None None None None I None 0 0 None 0 0 None 0 0 8.99671E-07 0 0
L/V None None 0.979 N 0.569 0.255 0.501308276186 gnomAD-4.0.0 6.84426E-07 None None None None I None 0 0 None 0 0 None 0 0 8.99671E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.7466 likely_pathogenic 0.7214 pathogenic -0.618 Destabilizing 0.968 D 0.568 neutral None None None None I
L/C 0.8483 likely_pathogenic 0.8408 pathogenic -0.763 Destabilizing 1.0 D 0.643 neutral None None None None I
L/D 0.9784 likely_pathogenic 0.9763 pathogenic -0.097 Destabilizing 0.995 D 0.725 prob.delet. None None None None I
L/E 0.8966 likely_pathogenic 0.8845 pathogenic -0.162 Destabilizing 0.991 D 0.713 prob.delet. None None None None I
L/F 0.4186 ambiguous 0.3908 ambiguous -0.568 Destabilizing 0.998 D 0.614 neutral N 0.48487791 None None I
L/G 0.9197 likely_pathogenic 0.9093 pathogenic -0.771 Destabilizing 0.991 D 0.712 prob.delet. None None None None I
L/H 0.6504 likely_pathogenic 0.6239 pathogenic 0.079 Stabilizing 0.998 D 0.717 prob.delet. N 0.466013187 None None I
L/I 0.1847 likely_benign 0.1792 benign -0.323 Destabilizing 0.979 D 0.543 neutral N 0.473103531 None None I
L/K 0.7432 likely_pathogenic 0.7162 pathogenic -0.348 Destabilizing 0.982 D 0.586 neutral None None None None I
L/M 0.2438 likely_benign 0.224 benign -0.607 Destabilizing 0.998 D 0.592 neutral None None None None I
L/N 0.8481 likely_pathogenic 0.8273 pathogenic -0.254 Destabilizing 0.991 D 0.722 prob.delet. None None None None I
L/P 0.9433 likely_pathogenic 0.9418 pathogenic -0.392 Destabilizing 0.998 D 0.725 prob.delet. N 0.474647241 None None I
L/Q 0.5323 ambiguous 0.4855 ambiguous -0.406 Destabilizing 0.991 D 0.678 prob.neutral None None None None I
L/R 0.5604 ambiguous 0.541 ambiguous 0.148 Stabilizing 0.142 N 0.527 neutral N 0.485771737 None None I
L/S 0.8081 likely_pathogenic 0.7848 pathogenic -0.712 Destabilizing 0.991 D 0.667 neutral None None None None I
L/T 0.6845 likely_pathogenic 0.6667 pathogenic -0.666 Destabilizing 0.991 D 0.619 neutral None None None None I
L/V 0.2427 likely_benign 0.2298 benign -0.392 Destabilizing 0.979 D 0.569 neutral N 0.513131697 None None I
L/W 0.6804 likely_pathogenic 0.6744 pathogenic -0.578 Destabilizing 1.0 D 0.707 prob.neutral None None None None I
L/Y 0.726 likely_pathogenic 0.7103 pathogenic -0.351 Destabilizing 0.998 D 0.635 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.