Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28226 | 84901;84902;84903 | chr2:178561456;178561455;178561454 | chr2:179426183;179426182;179426181 |
N2AB | 26585 | 79978;79979;79980 | chr2:178561456;178561455;178561454 | chr2:179426183;179426182;179426181 |
N2A | 25658 | 77197;77198;77199 | chr2:178561456;178561455;178561454 | chr2:179426183;179426182;179426181 |
N2B | 19161 | 57706;57707;57708 | chr2:178561456;178561455;178561454 | chr2:179426183;179426182;179426181 |
Novex-1 | 19286 | 58081;58082;58083 | chr2:178561456;178561455;178561454 | chr2:179426183;179426182;179426181 |
Novex-2 | 19353 | 58282;58283;58284 | chr2:178561456;178561455;178561454 | chr2:179426183;179426182;179426181 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2154159665 | None | 0.698 | N | 0.66 | 0.262 | 0.290962096972 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
E/K | rs2154159665 | None | 0.698 | N | 0.66 | 0.262 | 0.290962096972 | gnomAD-4.0.0 | 2.02963E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20494E-06 | 4.69704E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6365 | likely_pathogenic | 0.6067 | pathogenic | -1.509 | Destabilizing | 0.822 | D | 0.605 | neutral | N | 0.498262132 | None | None | N |
E/C | 0.9553 | likely_pathogenic | 0.9567 | pathogenic | -0.917 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
E/D | 0.7733 | likely_pathogenic | 0.7386 | pathogenic | -1.754 | Destabilizing | 0.656 | D | 0.62 | neutral | N | 0.494249661 | None | None | N |
E/F | 0.9789 | likely_pathogenic | 0.9766 | pathogenic | -1.109 | Destabilizing | 0.978 | D | 0.74 | deleterious | None | None | None | None | N |
E/G | 0.7861 | likely_pathogenic | 0.7565 | pathogenic | -1.931 | Destabilizing | 0.822 | D | 0.574 | neutral | D | 0.52873665 | None | None | N |
E/H | 0.9322 | likely_pathogenic | 0.9273 | pathogenic | -1.21 | Destabilizing | 0.043 | N | 0.496 | neutral | None | None | None | None | N |
E/I | 0.8511 | likely_pathogenic | 0.8426 | pathogenic | -0.302 | Destabilizing | 0.978 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/K | 0.8101 | likely_pathogenic | 0.8012 | pathogenic | -1.705 | Destabilizing | 0.698 | D | 0.66 | neutral | N | 0.470990391 | None | None | N |
E/L | 0.9227 | likely_pathogenic | 0.9069 | pathogenic | -0.302 | Destabilizing | 0.86 | D | 0.652 | neutral | None | None | None | None | N |
E/M | 0.8566 | likely_pathogenic | 0.8452 | pathogenic | 0.471 | Stabilizing | 0.994 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/N | 0.8941 | likely_pathogenic | 0.8774 | pathogenic | -1.995 | Destabilizing | 0.86 | D | 0.573 | neutral | None | None | None | None | N |
E/P | 0.9988 | likely_pathogenic | 0.9986 | pathogenic | -0.689 | Destabilizing | 0.978 | D | 0.613 | neutral | None | None | None | None | N |
E/Q | 0.3157 | likely_benign | 0.3092 | benign | -1.678 | Destabilizing | 0.058 | N | 0.303 | neutral | N | 0.481214067 | None | None | N |
E/R | 0.8664 | likely_pathogenic | 0.8542 | pathogenic | -1.516 | Destabilizing | 0.754 | D | 0.576 | neutral | None | None | None | None | N |
E/S | 0.6557 | likely_pathogenic | 0.6196 | pathogenic | -2.631 | Highly Destabilizing | 0.86 | D | 0.609 | neutral | None | None | None | None | N |
E/T | 0.7291 | likely_pathogenic | 0.7005 | pathogenic | -2.241 | Highly Destabilizing | 0.86 | D | 0.578 | neutral | None | None | None | None | N |
E/V | 0.7083 | likely_pathogenic | 0.696 | pathogenic | -0.689 | Destabilizing | 0.942 | D | 0.643 | neutral | N | 0.47124388 | None | None | N |
E/W | 0.9951 | likely_pathogenic | 0.9945 | pathogenic | -1.162 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
E/Y | 0.9712 | likely_pathogenic | 0.9692 | pathogenic | -0.944 | Destabilizing | 0.956 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.