Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28262 | 85009;85010;85011 | chr2:178561348;178561347;178561346 | chr2:179426075;179426074;179426073 |
N2AB | 26621 | 80086;80087;80088 | chr2:178561348;178561347;178561346 | chr2:179426075;179426074;179426073 |
N2A | 25694 | 77305;77306;77307 | chr2:178561348;178561347;178561346 | chr2:179426075;179426074;179426073 |
N2B | 19197 | 57814;57815;57816 | chr2:178561348;178561347;178561346 | chr2:179426075;179426074;179426073 |
Novex-1 | 19322 | 58189;58190;58191 | chr2:178561348;178561347;178561346 | chr2:179426075;179426074;179426073 |
Novex-2 | 19389 | 58390;58391;58392 | chr2:178561348;178561347;178561346 | chr2:179426075;179426074;179426073 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1703591532 | None | 0.014 | N | 0.262 | 0.134 | 0.242825505644 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1703591532 | None | 0.014 | N | 0.262 | 0.134 | 0.242825505644 | gnomAD-4.0.0 | 6.57514E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47024E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.128 | likely_benign | 0.1365 | benign | -0.608 | Destabilizing | 0.656 | D | 0.569 | neutral | N | 0.489718907 | None | None | N |
T/C | 0.4717 | ambiguous | 0.4784 | ambiguous | -0.366 | Destabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | N |
T/D | 0.5755 | likely_pathogenic | 0.5779 | pathogenic | 0.234 | Stabilizing | 0.993 | D | 0.656 | neutral | None | None | None | None | N |
T/E | 0.4166 | ambiguous | 0.4249 | ambiguous | 0.2 | Stabilizing | 0.993 | D | 0.598 | neutral | None | None | None | None | N |
T/F | 0.3317 | likely_benign | 0.3269 | benign | -0.86 | Destabilizing | 0.956 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/G | 0.3748 | ambiguous | 0.3889 | ambiguous | -0.811 | Destabilizing | 0.978 | D | 0.623 | neutral | None | None | None | None | N |
T/H | 0.4133 | ambiguous | 0.4234 | ambiguous | -1.041 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/I | 0.1682 | likely_benign | 0.1689 | benign | -0.178 | Destabilizing | 0.014 | N | 0.262 | neutral | N | 0.447890927 | None | None | N |
T/K | 0.3415 | ambiguous | 0.3359 | benign | -0.488 | Destabilizing | 0.97 | D | 0.606 | neutral | N | 0.485715809 | None | None | N |
T/L | 0.1153 | likely_benign | 0.1122 | benign | -0.178 | Destabilizing | 0.303 | N | 0.472 | neutral | None | None | None | None | N |
T/M | 0.0971 | likely_benign | 0.0987 | benign | -0.003 | Destabilizing | 0.559 | D | 0.423 | neutral | None | None | None | None | N |
T/N | 0.219 | likely_benign | 0.2279 | benign | -0.345 | Destabilizing | 0.993 | D | 0.577 | neutral | None | None | None | None | N |
T/P | 0.5957 | likely_pathogenic | 0.6163 | pathogenic | -0.29 | Destabilizing | 0.99 | D | 0.682 | prob.neutral | N | 0.493604551 | None | None | N |
T/Q | 0.3319 | likely_benign | 0.3393 | benign | -0.519 | Destabilizing | 0.978 | D | 0.673 | neutral | None | None | None | None | N |
T/R | 0.2837 | likely_benign | 0.2863 | benign | -0.235 | Destabilizing | 0.97 | D | 0.681 | prob.neutral | N | 0.472409196 | None | None | N |
T/S | 0.1665 | likely_benign | 0.1706 | benign | -0.633 | Destabilizing | 0.904 | D | 0.543 | neutral | N | 0.477266897 | None | None | N |
T/V | 0.1401 | likely_benign | 0.138 | benign | -0.29 | Destabilizing | 0.303 | N | 0.474 | neutral | None | None | None | None | N |
T/W | 0.6559 | likely_pathogenic | 0.6562 | pathogenic | -0.81 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
T/Y | 0.4026 | ambiguous | 0.4034 | ambiguous | -0.561 | Destabilizing | 0.978 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.