Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28263 | 85012;85013;85014 | chr2:178561345;178561344;178561343 | chr2:179426072;179426071;179426070 |
N2AB | 26622 | 80089;80090;80091 | chr2:178561345;178561344;178561343 | chr2:179426072;179426071;179426070 |
N2A | 25695 | 77308;77309;77310 | chr2:178561345;178561344;178561343 | chr2:179426072;179426071;179426070 |
N2B | 19198 | 57817;57818;57819 | chr2:178561345;178561344;178561343 | chr2:179426072;179426071;179426070 |
Novex-1 | 19323 | 58192;58193;58194 | chr2:178561345;178561344;178561343 | chr2:179426072;179426071;179426070 |
Novex-2 | 19390 | 58393;58394;58395 | chr2:178561345;178561344;178561343 | chr2:179426072;179426071;179426070 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs762665595 | 0.457 | 0.067 | N | 0.265 | 0.107 | 0.126345400529 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 7.32654E-05 |
N/Y | rs762665595 | -0.433 | 0.998 | N | 0.599 | 0.413 | 0.535152128566 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.202 | likely_benign | 0.2079 | benign | -0.599 | Destabilizing | 0.968 | D | 0.534 | neutral | None | None | None | None | N |
N/C | 0.292 | likely_benign | 0.3072 | benign | 0.249 | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
N/D | 0.1497 | likely_benign | 0.1474 | benign | -0.281 | Destabilizing | 0.067 | N | 0.265 | neutral | N | 0.442039603 | None | None | N |
N/E | 0.4291 | ambiguous | 0.4322 | ambiguous | -0.278 | Destabilizing | 0.938 | D | 0.433 | neutral | None | None | None | None | N |
N/F | 0.5799 | likely_pathogenic | 0.583 | pathogenic | -0.787 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
N/G | 0.2908 | likely_benign | 0.2878 | benign | -0.833 | Destabilizing | 0.968 | D | 0.399 | neutral | None | None | None | None | N |
N/H | 0.1149 | likely_benign | 0.113 | benign | -0.836 | Destabilizing | 0.998 | D | 0.577 | neutral | N | 0.472257838 | None | None | N |
N/I | 0.3106 | likely_benign | 0.3319 | benign | -0.05 | Destabilizing | 0.994 | D | 0.681 | prob.neutral | N | 0.468979382 | None | None | N |
N/K | 0.4142 | ambiguous | 0.4032 | ambiguous | -0.02 | Destabilizing | 0.958 | D | 0.537 | neutral | N | 0.501954698 | None | None | N |
N/L | 0.3316 | likely_benign | 0.3381 | benign | -0.05 | Destabilizing | 0.995 | D | 0.665 | neutral | None | None | None | None | N |
N/M | 0.3977 | ambiguous | 0.4053 | ambiguous | 0.51 | Stabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | N |
N/P | 0.9658 | likely_pathogenic | 0.9706 | pathogenic | -0.205 | Destabilizing | 0.995 | D | 0.609 | neutral | None | None | None | None | N |
N/Q | 0.3861 | ambiguous | 0.3835 | ambiguous | -0.637 | Destabilizing | 0.995 | D | 0.601 | neutral | None | None | None | None | N |
N/R | 0.3851 | ambiguous | 0.3689 | ambiguous | 0.051 | Stabilizing | 0.995 | D | 0.609 | neutral | None | None | None | None | N |
N/S | 0.08 | likely_benign | 0.0829 | benign | -0.401 | Destabilizing | 0.958 | D | 0.399 | neutral | N | 0.446157344 | None | None | N |
N/T | 0.1518 | likely_benign | 0.1609 | benign | -0.234 | Destabilizing | 0.958 | D | 0.515 | neutral | N | 0.475763331 | None | None | N |
N/V | 0.2517 | likely_benign | 0.2655 | benign | -0.205 | Destabilizing | 0.995 | D | 0.661 | neutral | None | None | None | None | N |
N/W | 0.8037 | likely_pathogenic | 0.8198 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
N/Y | 0.2087 | likely_benign | 0.2107 | benign | -0.407 | Destabilizing | 0.998 | D | 0.599 | neutral | N | 0.495135033 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.