Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28278 | 85057;85058;85059 | chr2:178561300;178561299;178561298 | chr2:179426027;179426026;179426025 |
N2AB | 26637 | 80134;80135;80136 | chr2:178561300;178561299;178561298 | chr2:179426027;179426026;179426025 |
N2A | 25710 | 77353;77354;77355 | chr2:178561300;178561299;178561298 | chr2:179426027;179426026;179426025 |
N2B | 19213 | 57862;57863;57864 | chr2:178561300;178561299;178561298 | chr2:179426027;179426026;179426025 |
Novex-1 | 19338 | 58237;58238;58239 | chr2:178561300;178561299;178561298 | chr2:179426027;179426026;179426025 |
Novex-2 | 19405 | 58438;58439;58440 | chr2:178561300;178561299;178561298 | chr2:179426027;179426026;179426025 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs1336515508 | 1.122 | 0.942 | N | 0.649 | 0.359 | 0.472344434578 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
Y/D | rs1336515508 | 1.122 | 0.942 | N | 0.649 | 0.359 | 0.472344434578 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/D | rs1336515508 | 1.122 | 0.942 | N | 0.649 | 0.359 | 0.472344434578 | gnomAD-4.0.0 | 2.56221E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.7857E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7124 | likely_pathogenic | 0.6994 | pathogenic | -0.71 | Destabilizing | 0.86 | D | 0.519 | neutral | None | None | None | None | I |
Y/C | 0.2615 | likely_benign | 0.2514 | benign | 0.295 | Stabilizing | 0.997 | D | 0.666 | neutral | N | 0.486796332 | None | None | I |
Y/D | 0.4271 | ambiguous | 0.4312 | ambiguous | 0.879 | Stabilizing | 0.942 | D | 0.649 | neutral | N | 0.478088043 | None | None | I |
Y/E | 0.8162 | likely_pathogenic | 0.7961 | pathogenic | 0.845 | Stabilizing | 0.956 | D | 0.531 | neutral | None | None | None | None | I |
Y/F | 0.1165 | likely_benign | 0.1156 | benign | -0.492 | Destabilizing | 0.014 | N | 0.311 | neutral | N | 0.480496417 | None | None | I |
Y/G | 0.5016 | ambiguous | 0.5065 | ambiguous | -0.895 | Destabilizing | 0.956 | D | 0.555 | neutral | None | None | None | None | I |
Y/H | 0.2445 | likely_benign | 0.2246 | benign | 0.136 | Stabilizing | 0.032 | N | 0.286 | neutral | N | 0.504103995 | None | None | I |
Y/I | 0.7649 | likely_pathogenic | 0.758 | pathogenic | -0.254 | Destabilizing | 0.956 | D | 0.486 | neutral | None | None | None | None | I |
Y/K | 0.7708 | likely_pathogenic | 0.739 | pathogenic | 0.361 | Stabilizing | 0.956 | D | 0.611 | neutral | None | None | None | None | I |
Y/L | 0.6726 | likely_pathogenic | 0.672 | pathogenic | -0.254 | Destabilizing | 0.754 | D | 0.537 | neutral | None | None | None | None | I |
Y/M | 0.7819 | likely_pathogenic | 0.7845 | pathogenic | 0.076 | Stabilizing | 0.998 | D | 0.522 | neutral | None | None | None | None | I |
Y/N | 0.1903 | likely_benign | 0.2214 | benign | 0.29 | Stabilizing | 0.942 | D | 0.618 | neutral | N | 0.467239118 | None | None | I |
Y/P | 0.9758 | likely_pathogenic | 0.9733 | pathogenic | -0.385 | Destabilizing | 0.993 | D | 0.649 | neutral | None | None | None | None | I |
Y/Q | 0.6775 | likely_pathogenic | 0.6462 | pathogenic | 0.248 | Stabilizing | 0.956 | D | 0.52 | neutral | None | None | None | None | I |
Y/R | 0.5441 | ambiguous | 0.4941 | ambiguous | 0.69 | Stabilizing | 0.956 | D | 0.619 | neutral | None | None | None | None | I |
Y/S | 0.2958 | likely_benign | 0.289 | benign | -0.173 | Destabilizing | 0.942 | D | 0.509 | neutral | N | 0.493905644 | None | None | I |
Y/T | 0.6046 | likely_pathogenic | 0.5907 | pathogenic | -0.115 | Destabilizing | 0.978 | D | 0.608 | neutral | None | None | None | None | I |
Y/V | 0.6599 | likely_pathogenic | 0.6395 | pathogenic | -0.385 | Destabilizing | 0.86 | D | 0.506 | neutral | None | None | None | None | I |
Y/W | 0.5389 | ambiguous | 0.5167 | ambiguous | -0.614 | Destabilizing | 0.998 | D | 0.5 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.