Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28294 | 85105;85106;85107 | chr2:178561252;178561251;178561250 | chr2:179425979;179425978;179425977 |
N2AB | 26653 | 80182;80183;80184 | chr2:178561252;178561251;178561250 | chr2:179425979;179425978;179425977 |
N2A | 25726 | 77401;77402;77403 | chr2:178561252;178561251;178561250 | chr2:179425979;179425978;179425977 |
N2B | 19229 | 57910;57911;57912 | chr2:178561252;178561251;178561250 | chr2:179425979;179425978;179425977 |
Novex-1 | 19354 | 58285;58286;58287 | chr2:178561252;178561251;178561250 | chr2:179425979;179425978;179425977 |
Novex-2 | 19421 | 58486;58487;58488 | chr2:178561252;178561251;178561250 | chr2:179425979;179425978;179425977 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs747855990 | -1.461 | 0.999 | N | 0.561 | 0.152 | 0.471941563831 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
L/V | rs747855990 | -1.461 | 0.999 | N | 0.561 | 0.152 | 0.471941563831 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85811E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6567 | likely_pathogenic | 0.6406 | pathogenic | -2.297 | Highly Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
L/C | 0.762 | likely_pathogenic | 0.767 | pathogenic | -1.304 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
L/D | 0.93 | likely_pathogenic | 0.919 | pathogenic | -2.233 | Highly Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/E | 0.792 | likely_pathogenic | 0.7708 | pathogenic | -2.141 | Highly Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/F | 0.3741 | ambiguous | 0.3497 | ambiguous | -1.444 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
L/G | 0.8172 | likely_pathogenic | 0.8122 | pathogenic | -2.704 | Highly Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/H | 0.6238 | likely_pathogenic | 0.6079 | pathogenic | -1.971 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
L/I | 0.1493 | likely_benign | 0.1271 | benign | -1.177 | Destabilizing | 0.999 | D | 0.512 | neutral | N | 0.50280006 | None | None | N |
L/K | 0.7231 | likely_pathogenic | 0.7204 | pathogenic | -1.615 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/M | 0.1861 | likely_benign | 0.1853 | benign | -0.93 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
L/N | 0.7262 | likely_pathogenic | 0.6985 | pathogenic | -1.56 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
L/P | 0.9024 | likely_pathogenic | 0.8857 | pathogenic | -1.527 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.511592902 | None | None | N |
L/Q | 0.5093 | ambiguous | 0.5076 | ambiguous | -1.661 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.478508355 | None | None | N |
L/R | 0.6725 | likely_pathogenic | 0.677 | pathogenic | -1.063 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | D | 0.52407941 | None | None | N |
L/S | 0.7428 | likely_pathogenic | 0.7272 | pathogenic | -2.187 | Highly Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
L/T | 0.6241 | likely_pathogenic | 0.603 | pathogenic | -1.987 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/V | 0.2028 | likely_benign | 0.1856 | benign | -1.527 | Destabilizing | 0.999 | D | 0.561 | neutral | N | 0.465684467 | None | None | N |
L/W | 0.5798 | likely_pathogenic | 0.5728 | pathogenic | -1.668 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/Y | 0.6157 | likely_pathogenic | 0.5853 | pathogenic | -1.455 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.