Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2829485105;85106;85107 chr2:178561252;178561251;178561250chr2:179425979;179425978;179425977
N2AB2665380182;80183;80184 chr2:178561252;178561251;178561250chr2:179425979;179425978;179425977
N2A2572677401;77402;77403 chr2:178561252;178561251;178561250chr2:179425979;179425978;179425977
N2B1922957910;57911;57912 chr2:178561252;178561251;178561250chr2:179425979;179425978;179425977
Novex-11935458285;58286;58287 chr2:178561252;178561251;178561250chr2:179425979;179425978;179425977
Novex-21942158486;58487;58488 chr2:178561252;178561251;178561250chr2:179425979;179425978;179425977
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Fn3-94
  • Domain position: 43
  • Structural Position: 50
  • Q(SASA): 0.3862
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/V rs747855990 -1.461 0.999 N 0.561 0.152 0.471941563831 gnomAD-2.1.1 4.02E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.89E-06 0
L/V rs747855990 -1.461 0.999 N 0.561 0.152 0.471941563831 gnomAD-4.0.0 1.59139E-06 None None None None N None 0 0 None 0 0 None 0 0 2.85811E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.6567 likely_pathogenic 0.6406 pathogenic -2.297 Highly Destabilizing 0.999 D 0.626 neutral None None None None N
L/C 0.762 likely_pathogenic 0.767 pathogenic -1.304 Destabilizing 1.0 D 0.613 neutral None None None None N
L/D 0.93 likely_pathogenic 0.919 pathogenic -2.233 Highly Destabilizing 1.0 D 0.699 prob.neutral None None None None N
L/E 0.792 likely_pathogenic 0.7708 pathogenic -2.141 Highly Destabilizing 1.0 D 0.727 prob.delet. None None None None N
L/F 0.3741 ambiguous 0.3497 ambiguous -1.444 Destabilizing 1.0 D 0.663 neutral None None None None N
L/G 0.8172 likely_pathogenic 0.8122 pathogenic -2.704 Highly Destabilizing 1.0 D 0.73 prob.delet. None None None None N
L/H 0.6238 likely_pathogenic 0.6079 pathogenic -1.971 Destabilizing 1.0 D 0.678 prob.neutral None None None None N
L/I 0.1493 likely_benign 0.1271 benign -1.177 Destabilizing 0.999 D 0.512 neutral N 0.50280006 None None N
L/K 0.7231 likely_pathogenic 0.7204 pathogenic -1.615 Destabilizing 1.0 D 0.727 prob.delet. None None None None N
L/M 0.1861 likely_benign 0.1853 benign -0.93 Destabilizing 1.0 D 0.63 neutral None None None None N
L/N 0.7262 likely_pathogenic 0.6985 pathogenic -1.56 Destabilizing 1.0 D 0.704 prob.neutral None None None None N
L/P 0.9024 likely_pathogenic 0.8857 pathogenic -1.527 Destabilizing 1.0 D 0.703 prob.neutral N 0.511592902 None None N
L/Q 0.5093 ambiguous 0.5076 ambiguous -1.661 Destabilizing 1.0 D 0.709 prob.delet. N 0.478508355 None None N
L/R 0.6725 likely_pathogenic 0.677 pathogenic -1.063 Destabilizing 1.0 D 0.731 prob.delet. D 0.52407941 None None N
L/S 0.7428 likely_pathogenic 0.7272 pathogenic -2.187 Highly Destabilizing 1.0 D 0.72 prob.delet. None None None None N
L/T 0.6241 likely_pathogenic 0.603 pathogenic -1.987 Destabilizing 1.0 D 0.71 prob.delet. None None None None N
L/V 0.2028 likely_benign 0.1856 benign -1.527 Destabilizing 0.999 D 0.561 neutral N 0.465684467 None None N
L/W 0.5798 likely_pathogenic 0.5728 pathogenic -1.668 Destabilizing 1.0 D 0.679 prob.neutral None None None None N
L/Y 0.6157 likely_pathogenic 0.5853 pathogenic -1.455 Destabilizing 1.0 D 0.675 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.