Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2830 | 8713;8714;8715 | chr2:178770213;178770212;178770211 | chr2:179634940;179634939;179634938 |
N2AB | 2830 | 8713;8714;8715 | chr2:178770213;178770212;178770211 | chr2:179634940;179634939;179634938 |
N2A | 2830 | 8713;8714;8715 | chr2:178770213;178770212;178770211 | chr2:179634940;179634939;179634938 |
N2B | 2784 | 8575;8576;8577 | chr2:178770213;178770212;178770211 | chr2:179634940;179634939;179634938 |
Novex-1 | 2784 | 8575;8576;8577 | chr2:178770213;178770212;178770211 | chr2:179634940;179634939;179634938 |
Novex-2 | 2784 | 8575;8576;8577 | chr2:178770213;178770212;178770211 | chr2:179634940;179634939;179634938 |
Novex-3 | 2830 | 8713;8714;8715 | chr2:178770213;178770212;178770211 | chr2:179634940;179634939;179634938 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs768672643 | 0.434 | 0.884 | N | 0.307 | 0.142 | 0.0954503805726 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4337 | ambiguous | 0.509 | ambiguous | -0.051 | Destabilizing | 0.998 | D | 0.606 | neutral | None | None | None | None | N |
K/C | 0.6812 | likely_pathogenic | 0.7251 | pathogenic | -0.155 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
K/D | 0.3915 | ambiguous | 0.4551 | ambiguous | 0.083 | Stabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
K/E | 0.1908 | likely_benign | 0.2379 | benign | 0.108 | Stabilizing | 0.996 | D | 0.517 | neutral | N | 0.441465445 | None | None | N |
K/F | 0.8859 | likely_pathogenic | 0.9172 | pathogenic | -0.176 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
K/G | 0.2629 | likely_benign | 0.2993 | benign | -0.28 | Destabilizing | 0.997 | D | 0.573 | neutral | None | None | None | None | N |
K/H | 0.2702 | likely_benign | 0.3048 | benign | -0.595 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
K/I | 0.7872 | likely_pathogenic | 0.8452 | pathogenic | 0.48 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
K/L | 0.5638 | ambiguous | 0.6332 | pathogenic | 0.48 | Stabilizing | 1.0 | D | 0.555 | neutral | None | None | None | None | N |
K/M | 0.4191 | ambiguous | 0.5031 | ambiguous | 0.218 | Stabilizing | 1.0 | D | 0.61 | neutral | N | 0.508408894 | None | None | N |
K/N | 0.2338 | likely_benign | 0.2789 | benign | 0.208 | Stabilizing | 0.884 | D | 0.307 | neutral | N | 0.376866368 | None | None | N |
K/P | 0.9229 | likely_pathogenic | 0.9397 | pathogenic | 0.332 | Stabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
K/Q | 0.114 | likely_benign | 0.1284 | benign | 0.075 | Stabilizing | 0.999 | D | 0.593 | neutral | N | 0.448540424 | None | None | N |
K/R | 0.0852 | likely_benign | 0.0856 | benign | -0.095 | Destabilizing | 0.998 | D | 0.504 | neutral | N | 0.441834315 | None | None | N |
K/S | 0.3664 | ambiguous | 0.4305 | ambiguous | -0.27 | Destabilizing | 0.997 | D | 0.53 | neutral | None | None | None | None | N |
K/T | 0.3911 | ambiguous | 0.4834 | ambiguous | -0.086 | Destabilizing | 0.999 | D | 0.62 | neutral | N | 0.465794469 | None | None | N |
K/V | 0.699 | likely_pathogenic | 0.7732 | pathogenic | 0.332 | Stabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
K/W | 0.8714 | likely_pathogenic | 0.8966 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
K/Y | 0.6865 | likely_pathogenic | 0.7419 | pathogenic | 0.15 | Stabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.