Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28311 | 85156;85157;85158 | chr2:178561201;178561200;178561199 | chr2:179425928;179425927;179425926 |
N2AB | 26670 | 80233;80234;80235 | chr2:178561201;178561200;178561199 | chr2:179425928;179425927;179425926 |
N2A | 25743 | 77452;77453;77454 | chr2:178561201;178561200;178561199 | chr2:179425928;179425927;179425926 |
N2B | 19246 | 57961;57962;57963 | chr2:178561201;178561200;178561199 | chr2:179425928;179425927;179425926 |
Novex-1 | 19371 | 58336;58337;58338 | chr2:178561201;178561200;178561199 | chr2:179425928;179425927;179425926 |
Novex-2 | 19438 | 58537;58538;58539 | chr2:178561201;178561200;178561199 | chr2:179425928;179425927;179425926 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.032 | N | 0.475 | 0.142 | 0.354183961838 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.232 | likely_benign | 0.2072 | benign | -1.933 | Destabilizing | 0.754 | D | 0.547 | neutral | None | None | None | None | N |
Y/C | 0.0909 | likely_benign | 0.0899 | benign | -0.771 | Destabilizing | 0.032 | N | 0.475 | neutral | N | 0.492929783 | None | None | N |
Y/D | 0.1992 | likely_benign | 0.1654 | benign | -0.56 | Destabilizing | 0.99 | D | 0.705 | prob.neutral | N | 0.49223635 | None | None | N |
Y/E | 0.3512 | ambiguous | 0.3089 | benign | -0.453 | Destabilizing | 0.993 | D | 0.698 | prob.neutral | None | None | None | None | N |
Y/F | 0.0677 | likely_benign | 0.069 | benign | -0.562 | Destabilizing | 0.014 | N | 0.479 | neutral | N | 0.423280484 | None | None | N |
Y/G | 0.3121 | likely_benign | 0.2738 | benign | -2.252 | Highly Destabilizing | 0.978 | D | 0.636 | neutral | None | None | None | None | N |
Y/H | 0.1007 | likely_benign | 0.0871 | benign | -0.542 | Destabilizing | 0.99 | D | 0.653 | neutral | N | 0.427859584 | None | None | N |
Y/I | 0.2432 | likely_benign | 0.2092 | benign | -0.965 | Destabilizing | 0.915 | D | 0.638 | neutral | None | None | None | None | N |
Y/K | 0.4327 | ambiguous | 0.3576 | ambiguous | -0.988 | Destabilizing | 0.978 | D | 0.695 | prob.neutral | None | None | None | None | N |
Y/L | 0.3337 | likely_benign | 0.2804 | benign | -0.965 | Destabilizing | 0.754 | D | 0.543 | neutral | None | None | None | None | N |
Y/M | 0.3853 | ambiguous | 0.3567 | ambiguous | -0.722 | Destabilizing | 0.994 | D | 0.687 | prob.neutral | None | None | None | None | N |
Y/N | 0.1017 | likely_benign | 0.0839 | benign | -1.447 | Destabilizing | 0.99 | D | 0.701 | prob.neutral | N | 0.422587051 | None | None | N |
Y/P | 0.9601 | likely_pathogenic | 0.9366 | pathogenic | -1.283 | Destabilizing | 0.993 | D | 0.709 | prob.delet. | None | None | None | None | N |
Y/Q | 0.2525 | likely_benign | 0.2091 | benign | -1.309 | Destabilizing | 0.993 | D | 0.701 | prob.neutral | None | None | None | None | N |
Y/R | 0.2643 | likely_benign | 0.2098 | benign | -0.615 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | None | None | None | None | N |
Y/S | 0.0953 | likely_benign | 0.083 | benign | -1.972 | Destabilizing | 0.942 | D | 0.615 | neutral | N | 0.400091406 | None | None | N |
Y/T | 0.1688 | likely_benign | 0.1491 | benign | -1.77 | Destabilizing | 0.956 | D | 0.617 | neutral | None | None | None | None | N |
Y/V | 0.1831 | likely_benign | 0.1614 | benign | -1.283 | Destabilizing | 0.86 | D | 0.587 | neutral | None | None | None | None | N |
Y/W | 0.2973 | likely_benign | 0.2784 | benign | -0.132 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.