Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28313 | 85162;85163;85164 | chr2:178561195;178561194;178561193 | chr2:179425922;179425921;179425920 |
N2AB | 26672 | 80239;80240;80241 | chr2:178561195;178561194;178561193 | chr2:179425922;179425921;179425920 |
N2A | 25745 | 77458;77459;77460 | chr2:178561195;178561194;178561193 | chr2:179425922;179425921;179425920 |
N2B | 19248 | 57967;57968;57969 | chr2:178561195;178561194;178561193 | chr2:179425922;179425921;179425920 |
Novex-1 | 19373 | 58342;58343;58344 | chr2:178561195;178561194;178561193 | chr2:179425922;179425921;179425920 |
Novex-2 | 19440 | 58543;58544;58545 | chr2:178561195;178561194;178561193 | chr2:179425922;179425921;179425920 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs896539539 | None | 0.801 | N | 0.563 | 0.246 | 0.357929162469 | gnomAD-4.0.0 | 1.59184E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85809E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2435 | likely_benign | 0.2051 | benign | -1.016 | Destabilizing | 0.801 | D | 0.527 | neutral | N | 0.471997151 | None | None | N |
E/C | 0.8541 | likely_pathogenic | 0.8308 | pathogenic | -0.42 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | N |
E/D | 0.1643 | likely_benign | 0.1354 | benign | -0.864 | Destabilizing | 0.002 | N | 0.221 | neutral | N | 0.451083161 | None | None | N |
E/F | 0.8605 | likely_pathogenic | 0.8203 | pathogenic | -0.223 | Destabilizing | 0.991 | D | 0.62 | neutral | None | None | None | None | N |
E/G | 0.4367 | ambiguous | 0.3621 | ambiguous | -1.396 | Destabilizing | 0.801 | D | 0.563 | neutral | N | 0.517038794 | None | None | N |
E/H | 0.5715 | likely_pathogenic | 0.4985 | ambiguous | -0.281 | Destabilizing | 0.991 | D | 0.55 | neutral | None | None | None | None | N |
E/I | 0.4119 | ambiguous | 0.3588 | ambiguous | 0.036 | Stabilizing | 0.974 | D | 0.633 | neutral | None | None | None | None | N |
E/K | 0.3177 | likely_benign | 0.2542 | benign | -0.25 | Destabilizing | 0.801 | D | 0.527 | neutral | N | 0.414469 | None | None | N |
E/L | 0.4666 | ambiguous | 0.4124 | ambiguous | 0.036 | Stabilizing | 0.974 | D | 0.613 | neutral | None | None | None | None | N |
E/M | 0.5351 | ambiguous | 0.4963 | ambiguous | 0.505 | Stabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
E/N | 0.3456 | ambiguous | 0.2853 | benign | -0.989 | Destabilizing | 0.728 | D | 0.511 | neutral | None | None | None | None | N |
E/P | 0.7321 | likely_pathogenic | 0.674 | pathogenic | -0.295 | Destabilizing | 0.974 | D | 0.594 | neutral | None | None | None | None | N |
E/Q | 0.2009 | likely_benign | 0.1811 | benign | -0.828 | Destabilizing | 0.891 | D | 0.525 | neutral | N | 0.466801975 | None | None | N |
E/R | 0.4509 | ambiguous | 0.3808 | ambiguous | 0.05 | Stabilizing | 0.974 | D | 0.563 | neutral | None | None | None | None | N |
E/S | 0.2865 | likely_benign | 0.2421 | benign | -1.312 | Destabilizing | 0.688 | D | 0.507 | neutral | None | None | None | None | N |
E/T | 0.209 | likely_benign | 0.1762 | benign | -0.965 | Destabilizing | 0.842 | D | 0.513 | neutral | None | None | None | None | N |
E/V | 0.2346 | likely_benign | 0.2062 | benign | -0.295 | Destabilizing | 0.966 | D | 0.619 | neutral | N | 0.433324119 | None | None | N |
E/W | 0.9515 | likely_pathogenic | 0.9349 | pathogenic | 0.185 | Stabilizing | 0.998 | D | 0.67 | neutral | None | None | None | None | N |
E/Y | 0.7661 | likely_pathogenic | 0.7002 | pathogenic | 0.106 | Stabilizing | 0.991 | D | 0.624 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.