Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28328 | 85207;85208;85209 | chr2:178561150;178561149;178561148 | chr2:179425877;179425876;179425875 |
N2AB | 26687 | 80284;80285;80286 | chr2:178561150;178561149;178561148 | chr2:179425877;179425876;179425875 |
N2A | 25760 | 77503;77504;77505 | chr2:178561150;178561149;178561148 | chr2:179425877;179425876;179425875 |
N2B | 19263 | 58012;58013;58014 | chr2:178561150;178561149;178561148 | chr2:179425877;179425876;179425875 |
Novex-1 | 19388 | 58387;58388;58389 | chr2:178561150;178561149;178561148 | chr2:179425877;179425876;179425875 |
Novex-2 | 19455 | 58588;58589;58590 | chr2:178561150;178561149;178561148 | chr2:179425877;179425876;179425875 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1703507521 | None | None | N | 0.235 | 0.269 | 0.276482976112 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5706 | likely_pathogenic | 0.4827 | ambiguous | -3.365 | Highly Destabilizing | 0.228 | N | 0.612 | neutral | None | None | None | None | N |
F/C | 0.3109 | likely_benign | 0.2637 | benign | -1.923 | Destabilizing | 0.921 | D | 0.639 | neutral | N | 0.485214377 | None | None | N |
F/D | 0.9617 | likely_pathogenic | 0.9365 | pathogenic | -3.377 | Highly Destabilizing | 0.94 | D | 0.672 | neutral | None | None | None | None | N |
F/E | 0.9351 | likely_pathogenic | 0.904 | pathogenic | -3.233 | Highly Destabilizing | 0.593 | D | 0.677 | prob.neutral | None | None | None | None | N |
F/G | 0.8837 | likely_pathogenic | 0.839 | pathogenic | -3.728 | Highly Destabilizing | 0.593 | D | 0.639 | neutral | None | None | None | None | N |
F/H | 0.6162 | likely_pathogenic | 0.5581 | ambiguous | -1.981 | Destabilizing | 0.94 | D | 0.659 | neutral | None | None | None | None | N |
F/I | 0.1714 | likely_benign | 0.1353 | benign | -2.178 | Highly Destabilizing | None | N | 0.244 | neutral | N | 0.369061997 | None | None | N |
F/K | 0.8225 | likely_pathogenic | 0.7757 | pathogenic | -2.214 | Highly Destabilizing | 0.593 | D | 0.679 | prob.neutral | None | None | None | None | N |
F/L | 0.6739 | likely_pathogenic | 0.6042 | pathogenic | -2.178 | Highly Destabilizing | None | N | 0.235 | neutral | N | 0.417103873 | None | None | N |
F/M | 0.3467 | ambiguous | 0.3105 | benign | -1.767 | Destabilizing | 0.716 | D | 0.636 | neutral | None | None | None | None | N |
F/N | 0.8161 | likely_pathogenic | 0.7439 | pathogenic | -2.462 | Highly Destabilizing | 0.94 | D | 0.687 | prob.neutral | None | None | None | None | N |
F/P | 0.9986 | likely_pathogenic | 0.9972 | pathogenic | -2.583 | Highly Destabilizing | 0.94 | D | 0.686 | prob.neutral | None | None | None | None | N |
F/Q | 0.7781 | likely_pathogenic | 0.7256 | pathogenic | -2.585 | Highly Destabilizing | 0.94 | D | 0.677 | prob.neutral | None | None | None | None | N |
F/R | 0.6899 | likely_pathogenic | 0.6315 | pathogenic | -1.404 | Destabilizing | 0.836 | D | 0.683 | prob.neutral | None | None | None | None | N |
F/S | 0.4966 | ambiguous | 0.398 | ambiguous | -3.105 | Highly Destabilizing | 0.523 | D | 0.648 | neutral | N | 0.438556581 | None | None | N |
F/T | 0.4507 | ambiguous | 0.3634 | ambiguous | -2.874 | Highly Destabilizing | 0.418 | N | 0.653 | neutral | None | None | None | None | N |
F/V | 0.2179 | likely_benign | 0.1722 | benign | -2.583 | Highly Destabilizing | 0.021 | N | 0.507 | neutral | N | 0.445309195 | None | None | N |
F/W | 0.4875 | ambiguous | 0.4711 | ambiguous | -0.908 | Destabilizing | 0.983 | D | 0.663 | neutral | None | None | None | None | N |
F/Y | 0.1937 | likely_benign | 0.1769 | benign | -1.309 | Destabilizing | 0.523 | D | 0.6 | neutral | N | 0.468647414 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.