Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28332 | 85219;85220;85221 | chr2:178561138;178561137;178561136 | chr2:179425865;179425864;179425863 |
N2AB | 26691 | 80296;80297;80298 | chr2:178561138;178561137;178561136 | chr2:179425865;179425864;179425863 |
N2A | 25764 | 77515;77516;77517 | chr2:178561138;178561137;178561136 | chr2:179425865;179425864;179425863 |
N2B | 19267 | 58024;58025;58026 | chr2:178561138;178561137;178561136 | chr2:179425865;179425864;179425863 |
Novex-1 | 19392 | 58399;58400;58401 | chr2:178561138;178561137;178561136 | chr2:179425865;179425864;179425863 |
Novex-2 | 19459 | 58600;58601;58602 | chr2:178561138;178561137;178561136 | chr2:179425865;179425864;179425863 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.944 | N | 0.449 | 0.201 | 0.435043484731 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7293 | likely_pathogenic | 0.732 | pathogenic | -0.716 | Destabilizing | 0.999 | D | 0.488 | neutral | None | None | None | None | I |
A/D | 0.775 | likely_pathogenic | 0.7469 | pathogenic | -0.743 | Destabilizing | 0.805 | D | 0.551 | neutral | N | 0.501991984 | None | None | I |
A/E | 0.6661 | likely_pathogenic | 0.6353 | pathogenic | -0.903 | Destabilizing | 0.073 | N | 0.39 | neutral | None | None | None | None | I |
A/F | 0.6505 | likely_pathogenic | 0.635 | pathogenic | -1.141 | Destabilizing | 0.996 | D | 0.653 | neutral | None | None | None | None | I |
A/G | 0.3 | likely_benign | 0.2861 | benign | -0.445 | Destabilizing | 0.892 | D | 0.425 | neutral | N | 0.4623982 | None | None | I |
A/H | 0.8166 | likely_pathogenic | 0.8096 | pathogenic | -0.511 | Destabilizing | 0.997 | D | 0.639 | neutral | None | None | None | None | I |
A/I | 0.4759 | ambiguous | 0.4169 | ambiguous | -0.467 | Destabilizing | 0.987 | D | 0.525 | neutral | None | None | None | None | I |
A/K | 0.8514 | likely_pathogenic | 0.8368 | pathogenic | -0.579 | Destabilizing | 0.845 | D | 0.491 | neutral | None | None | None | None | I |
A/L | 0.367 | ambiguous | 0.3427 | ambiguous | -0.467 | Destabilizing | 0.916 | D | 0.492 | neutral | None | None | None | None | I |
A/M | 0.4076 | ambiguous | 0.3811 | ambiguous | -0.261 | Destabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | I |
A/N | 0.6075 | likely_pathogenic | 0.577 | pathogenic | -0.286 | Destabilizing | 0.975 | D | 0.636 | neutral | None | None | None | None | I |
A/P | 0.9069 | likely_pathogenic | 0.8714 | pathogenic | -0.411 | Destabilizing | 0.983 | D | 0.525 | neutral | N | 0.478992561 | None | None | I |
A/Q | 0.6693 | likely_pathogenic | 0.651 | pathogenic | -0.639 | Destabilizing | 0.95 | D | 0.525 | neutral | None | None | None | None | I |
A/R | 0.7621 | likely_pathogenic | 0.7491 | pathogenic | -0.085 | Destabilizing | 0.975 | D | 0.523 | neutral | None | None | None | None | I |
A/S | 0.1348 | likely_benign | 0.1303 | benign | -0.466 | Destabilizing | 0.243 | N | 0.258 | neutral | N | 0.477210969 | None | None | I |
A/T | 0.1859 | likely_benign | 0.1637 | benign | -0.559 | Destabilizing | 0.805 | D | 0.461 | neutral | N | 0.521943181 | None | None | I |
A/V | 0.2533 | likely_benign | 0.2184 | benign | -0.411 | Destabilizing | 0.944 | D | 0.449 | neutral | N | 0.474104263 | None | None | I |
A/W | 0.94 | likely_pathogenic | 0.933 | pathogenic | -1.257 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
A/Y | 0.798 | likely_pathogenic | 0.7897 | pathogenic | -0.891 | Destabilizing | 0.996 | D | 0.656 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.