Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28342 | 85249;85250;85251 | chr2:178561108;178561107;178561106 | chr2:179425835;179425834;179425833 |
N2AB | 26701 | 80326;80327;80328 | chr2:178561108;178561107;178561106 | chr2:179425835;179425834;179425833 |
N2A | 25774 | 77545;77546;77547 | chr2:178561108;178561107;178561106 | chr2:179425835;179425834;179425833 |
N2B | 19277 | 58054;58055;58056 | chr2:178561108;178561107;178561106 | chr2:179425835;179425834;179425833 |
Novex-1 | 19402 | 58429;58430;58431 | chr2:178561108;178561107;178561106 | chr2:179425835;179425834;179425833 |
Novex-2 | 19469 | 58630;58631;58632 | chr2:178561108;178561107;178561106 | chr2:179425835;179425834;179425833 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.938 | N | 0.595 | 0.243 | 0.193865811164 | gnomAD-4.0.0 | 1.59116E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1237 | likely_benign | 0.1316 | benign | -0.881 | Destabilizing | 0.307 | N | 0.494 | neutral | N | 0.472050292 | None | None | N |
S/C | 0.1461 | likely_benign | 0.1714 | benign | -0.618 | Destabilizing | 0.994 | D | 0.597 | neutral | N | 0.471111614 | None | None | N |
S/D | 0.7127 | likely_pathogenic | 0.7586 | pathogenic | -0.366 | Destabilizing | 0.74 | D | 0.523 | neutral | None | None | None | None | N |
S/E | 0.7985 | likely_pathogenic | 0.835 | pathogenic | -0.367 | Destabilizing | 0.74 | D | 0.516 | neutral | None | None | None | None | N |
S/F | 0.6092 | likely_pathogenic | 0.6709 | pathogenic | -1.015 | Destabilizing | 0.883 | D | 0.681 | prob.neutral | N | 0.485074812 | None | None | N |
S/G | 0.1556 | likely_benign | 0.1584 | benign | -1.128 | Destabilizing | 0.74 | D | 0.46 | neutral | None | None | None | None | N |
S/H | 0.6778 | likely_pathogenic | 0.7256 | pathogenic | -1.517 | Destabilizing | 0.996 | D | 0.587 | neutral | None | None | None | None | N |
S/I | 0.2992 | likely_benign | 0.3402 | ambiguous | -0.326 | Destabilizing | 0.587 | D | 0.665 | prob.neutral | None | None | None | None | N |
S/K | 0.8799 | likely_pathogenic | 0.9169 | pathogenic | -0.734 | Destabilizing | 0.74 | D | 0.51 | neutral | None | None | None | None | N |
S/L | 0.24 | likely_benign | 0.2759 | benign | -0.326 | Destabilizing | 0.587 | D | 0.635 | neutral | None | None | None | None | N |
S/M | 0.3374 | likely_benign | 0.3515 | ambiguous | -0.03 | Destabilizing | 0.953 | D | 0.609 | neutral | None | None | None | None | N |
S/N | 0.248 | likely_benign | 0.2881 | benign | -0.681 | Destabilizing | 0.74 | D | 0.551 | neutral | None | None | None | None | N |
S/P | 0.1441 | likely_benign | 0.162 | benign | -0.478 | Destabilizing | 0.938 | D | 0.595 | neutral | N | 0.438532364 | None | None | N |
S/Q | 0.7753 | likely_pathogenic | 0.8098 | pathogenic | -0.878 | Destabilizing | 0.953 | D | 0.507 | neutral | None | None | None | None | N |
S/R | 0.8833 | likely_pathogenic | 0.9169 | pathogenic | -0.572 | Destabilizing | 0.953 | D | 0.587 | neutral | None | None | None | None | N |
S/T | 0.1208 | likely_benign | 0.1194 | benign | -0.733 | Destabilizing | 0.012 | N | 0.289 | neutral | N | 0.466855116 | None | None | N |
S/V | 0.2858 | likely_benign | 0.316 | benign | -0.478 | Destabilizing | 0.009 | N | 0.553 | neutral | None | None | None | None | N |
S/W | 0.7391 | likely_pathogenic | 0.784 | pathogenic | -0.939 | Destabilizing | 0.996 | D | 0.773 | deleterious | None | None | None | None | N |
S/Y | 0.5134 | ambiguous | 0.5924 | pathogenic | -0.698 | Destabilizing | 0.938 | D | 0.683 | prob.neutral | N | 0.484821323 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.