Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28369 | 85330;85331;85332 | chr2:178561027;178561026;178561025 | chr2:179425754;179425753;179425752 |
N2AB | 26728 | 80407;80408;80409 | chr2:178561027;178561026;178561025 | chr2:179425754;179425753;179425752 |
N2A | 25801 | 77626;77627;77628 | chr2:178561027;178561026;178561025 | chr2:179425754;179425753;179425752 |
N2B | 19304 | 58135;58136;58137 | chr2:178561027;178561026;178561025 | chr2:179425754;179425753;179425752 |
Novex-1 | 19429 | 58510;58511;58512 | chr2:178561027;178561026;178561025 | chr2:179425754;179425753;179425752 |
Novex-2 | 19496 | 58711;58712;58713 | chr2:178561027;178561026;178561025 | chr2:179425754;179425753;179425752 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.052 | D | 0.404 | 0.321 | 0.620047664876 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/D | rs1703451641 | None | 0.484 | D | 0.543 | 0.644 | 0.848468935609 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/D | rs1703451641 | None | 0.484 | D | 0.543 | 0.644 | 0.848468935609 | gnomAD-4.0.0 | 2.02995E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.4099E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4515 | ambiguous | 0.3846 | ambiguous | -1.855 | Destabilizing | 0.052 | N | 0.404 | neutral | D | 0.528136514 | None | None | I |
V/C | 0.8154 | likely_pathogenic | 0.7752 | pathogenic | -1.246 | Destabilizing | 0.935 | D | 0.461 | neutral | None | None | None | None | I |
V/D | 0.9121 | likely_pathogenic | 0.867 | pathogenic | -2.086 | Highly Destabilizing | 0.484 | N | 0.543 | neutral | D | 0.556830626 | None | None | I |
V/E | 0.7889 | likely_pathogenic | 0.7263 | pathogenic | -2.038 | Highly Destabilizing | 0.555 | D | 0.467 | neutral | None | None | None | None | I |
V/F | 0.3568 | ambiguous | 0.2943 | benign | -1.337 | Destabilizing | 0.317 | N | 0.441 | neutral | D | 0.556070158 | None | None | I |
V/G | 0.5669 | likely_pathogenic | 0.4752 | ambiguous | -2.228 | Highly Destabilizing | 0.484 | N | 0.521 | neutral | D | 0.529825602 | None | None | I |
V/H | 0.9013 | likely_pathogenic | 0.8577 | pathogenic | -1.851 | Destabilizing | 0.935 | D | 0.554 | neutral | None | None | None | None | I |
V/I | 0.0959 | likely_benign | 0.0835 | benign | -0.893 | Destabilizing | None | N | 0.151 | neutral | D | 0.523000053 | None | None | I |
V/K | 0.7251 | likely_pathogenic | 0.6615 | pathogenic | -1.674 | Destabilizing | 0.555 | D | 0.466 | neutral | None | None | None | None | I |
V/L | 0.2805 | likely_benign | 0.213 | benign | -0.893 | Destabilizing | 0.009 | N | 0.369 | neutral | N | 0.512718397 | None | None | I |
V/M | 0.2793 | likely_benign | 0.2263 | benign | -0.667 | Destabilizing | 0.38 | N | 0.464 | neutral | None | None | None | None | I |
V/N | 0.8272 | likely_pathogenic | 0.738 | pathogenic | -1.544 | Destabilizing | 0.555 | D | 0.542 | neutral | None | None | None | None | I |
V/P | 0.9543 | likely_pathogenic | 0.9299 | pathogenic | -1.182 | Destabilizing | 0.791 | D | 0.485 | neutral | None | None | None | None | I |
V/Q | 0.7103 | likely_pathogenic | 0.6417 | pathogenic | -1.664 | Destabilizing | 0.791 | D | 0.505 | neutral | None | None | None | None | I |
V/R | 0.6589 | likely_pathogenic | 0.5955 | pathogenic | -1.156 | Destabilizing | 0.555 | D | 0.561 | neutral | None | None | None | None | I |
V/S | 0.6685 | likely_pathogenic | 0.5725 | pathogenic | -2.055 | Highly Destabilizing | 0.081 | N | 0.452 | neutral | None | None | None | None | I |
V/T | 0.5018 | ambiguous | 0.4064 | ambiguous | -1.902 | Destabilizing | 0.001 | N | 0.133 | neutral | None | None | None | None | I |
V/W | 0.945 | likely_pathogenic | 0.915 | pathogenic | -1.643 | Destabilizing | 0.935 | D | 0.611 | neutral | None | None | None | None | I |
V/Y | 0.8052 | likely_pathogenic | 0.7341 | pathogenic | -1.357 | Destabilizing | 0.555 | D | 0.463 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.