Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28370 | 85333;85334;85335 | chr2:178561024;178561023;178561022 | chr2:179425751;179425750;179425749 |
N2AB | 26729 | 80410;80411;80412 | chr2:178561024;178561023;178561022 | chr2:179425751;179425750;179425749 |
N2A | 25802 | 77629;77630;77631 | chr2:178561024;178561023;178561022 | chr2:179425751;179425750;179425749 |
N2B | 19305 | 58138;58139;58140 | chr2:178561024;178561023;178561022 | chr2:179425751;179425750;179425749 |
Novex-1 | 19430 | 58513;58514;58515 | chr2:178561024;178561023;178561022 | chr2:179425751;179425750;179425749 |
Novex-2 | 19497 | 58714;58715;58716 | chr2:178561024;178561023;178561022 | chr2:179425751;179425750;179425749 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1316361788 | None | 0.025 | N | 0.299 | 0.11 | 0.207176502487 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5867 | likely_pathogenic | 0.5256 | ambiguous | -0.116 | Destabilizing | 0.916 | D | 0.661 | neutral | None | None | None | None | I |
K/C | 0.8017 | likely_pathogenic | 0.7712 | pathogenic | -0.413 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
K/D | 0.8252 | likely_pathogenic | 0.7785 | pathogenic | 0.029 | Stabilizing | 0.987 | D | 0.672 | neutral | None | None | None | None | I |
K/E | 0.3674 | ambiguous | 0.3122 | benign | 0.082 | Stabilizing | 0.892 | D | 0.629 | neutral | D | 0.534443624 | None | None | I |
K/F | 0.8625 | likely_pathogenic | 0.8372 | pathogenic | -0.091 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | I |
K/G | 0.7078 | likely_pathogenic | 0.6503 | pathogenic | -0.382 | Destabilizing | 0.975 | D | 0.628 | neutral | None | None | None | None | I |
K/H | 0.3677 | ambiguous | 0.3351 | benign | -0.587 | Destabilizing | 0.997 | D | 0.641 | neutral | None | None | None | None | I |
K/I | 0.6597 | likely_pathogenic | 0.5974 | pathogenic | 0.524 | Stabilizing | 0.983 | D | 0.709 | prob.delet. | N | 0.493165202 | None | None | I |
K/L | 0.5095 | ambiguous | 0.4498 | ambiguous | 0.524 | Stabilizing | 0.975 | D | 0.628 | neutral | None | None | None | None | I |
K/M | 0.3619 | ambiguous | 0.3118 | benign | 0.153 | Stabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | I |
K/N | 0.6277 | likely_pathogenic | 0.5696 | pathogenic | -0.129 | Destabilizing | 0.967 | D | 0.653 | neutral | N | 0.493213077 | None | None | I |
K/P | 0.7502 | likely_pathogenic | 0.6804 | pathogenic | 0.341 | Stabilizing | 0.996 | D | 0.65 | neutral | None | None | None | None | I |
K/Q | 0.2234 | likely_benign | 0.1938 | benign | -0.213 | Destabilizing | 0.967 | D | 0.654 | neutral | N | 0.499349615 | None | None | I |
K/R | 0.0871 | likely_benign | 0.085 | benign | -0.262 | Destabilizing | 0.025 | N | 0.299 | neutral | N | 0.447440715 | None | None | I |
K/S | 0.6599 | likely_pathogenic | 0.6086 | pathogenic | -0.634 | Destabilizing | 0.916 | D | 0.655 | neutral | None | None | None | None | I |
K/T | 0.3686 | ambiguous | 0.3164 | benign | -0.409 | Destabilizing | 0.967 | D | 0.648 | neutral | N | 0.489264409 | None | None | I |
K/V | 0.5858 | likely_pathogenic | 0.5226 | ambiguous | 0.341 | Stabilizing | 0.987 | D | 0.688 | prob.neutral | None | None | None | None | I |
K/W | 0.8219 | likely_pathogenic | 0.7966 | pathogenic | -0.087 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
K/Y | 0.723 | likely_pathogenic | 0.6856 | pathogenic | 0.237 | Stabilizing | 0.996 | D | 0.687 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.