Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28389 | 85390;85391;85392 | chr2:178560967;178560966;178560965 | chr2:179425694;179425693;179425692 |
N2AB | 26748 | 80467;80468;80469 | chr2:178560967;178560966;178560965 | chr2:179425694;179425693;179425692 |
N2A | 25821 | 77686;77687;77688 | chr2:178560967;178560966;178560965 | chr2:179425694;179425693;179425692 |
N2B | 19324 | 58195;58196;58197 | chr2:178560967;178560966;178560965 | chr2:179425694;179425693;179425692 |
Novex-1 | 19449 | 58570;58571;58572 | chr2:178560967;178560966;178560965 | chr2:179425694;179425693;179425692 |
Novex-2 | 19516 | 58771;58772;58773 | chr2:178560967;178560966;178560965 | chr2:179425694;179425693;179425692 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs755134776 | -2.271 | 0.062 | N | 0.641 | 0.515 | 0.693152146671 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66113E-04 |
I/T | rs755134776 | -2.271 | 0.062 | N | 0.641 | 0.515 | 0.693152146671 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3543 | ambiguous | 0.3554 | ambiguous | -1.934 | Destabilizing | None | N | 0.415 | neutral | None | None | None | None | I |
I/C | 0.6893 | likely_pathogenic | 0.6718 | pathogenic | -1.269 | Destabilizing | 0.824 | D | 0.717 | prob.delet. | None | None | None | None | I |
I/D | 0.9076 | likely_pathogenic | 0.9009 | pathogenic | -1.275 | Destabilizing | 0.555 | D | 0.784 | deleterious | None | None | None | None | I |
I/E | 0.821 | likely_pathogenic | 0.8065 | pathogenic | -1.145 | Destabilizing | 0.38 | N | 0.768 | deleterious | None | None | None | None | I |
I/F | 0.2838 | likely_benign | 0.259 | benign | -1.112 | Destabilizing | 0.317 | N | 0.633 | neutral | N | 0.521076189 | None | None | I |
I/G | 0.7602 | likely_pathogenic | 0.7491 | pathogenic | -2.39 | Highly Destabilizing | 0.081 | N | 0.755 | deleterious | None | None | None | None | I |
I/H | 0.7661 | likely_pathogenic | 0.7534 | pathogenic | -1.605 | Destabilizing | 0.935 | D | 0.792 | deleterious | None | None | None | None | I |
I/K | 0.6044 | likely_pathogenic | 0.5878 | pathogenic | -1.348 | Destabilizing | 0.38 | N | 0.767 | deleterious | None | None | None | None | I |
I/L | 0.1572 | likely_benign | 0.1403 | benign | -0.688 | Destabilizing | None | N | 0.224 | neutral | N | 0.506553105 | None | None | I |
I/M | 0.1568 | likely_benign | 0.1494 | benign | -0.624 | Destabilizing | 0.317 | N | 0.597 | neutral | D | 0.522090147 | None | None | I |
I/N | 0.4905 | ambiguous | 0.5038 | ambiguous | -1.392 | Destabilizing | 0.484 | N | 0.795 | deleterious | D | 0.549095172 | None | None | I |
I/P | 0.7593 | likely_pathogenic | 0.7391 | pathogenic | -1.076 | Destabilizing | 0.555 | D | 0.791 | deleterious | None | None | None | None | I |
I/Q | 0.6773 | likely_pathogenic | 0.6535 | pathogenic | -1.361 | Destabilizing | 0.555 | D | 0.799 | deleterious | None | None | None | None | I |
I/R | 0.5219 | ambiguous | 0.5122 | ambiguous | -0.985 | Destabilizing | 0.555 | D | 0.795 | deleterious | None | None | None | None | I |
I/S | 0.3759 | ambiguous | 0.3897 | ambiguous | -2.146 | Highly Destabilizing | 0.062 | N | 0.732 | prob.delet. | D | 0.525964488 | None | None | I |
I/T | 0.2835 | likely_benign | 0.2833 | benign | -1.87 | Destabilizing | 0.062 | N | 0.641 | neutral | N | 0.507771327 | None | None | I |
I/V | 0.0781 | likely_benign | 0.0737 | benign | -1.076 | Destabilizing | None | N | 0.183 | neutral | N | 0.445296126 | None | None | I |
I/W | 0.9338 | likely_pathogenic | 0.9174 | pathogenic | -1.298 | Destabilizing | 0.935 | D | 0.794 | deleterious | None | None | None | None | I |
I/Y | 0.6856 | likely_pathogenic | 0.6818 | pathogenic | -1.029 | Destabilizing | 0.555 | D | 0.731 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.