Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2840 | 8743;8744;8745 | chr2:178770183;178770182;178770181 | chr2:179634910;179634909;179634908 |
N2AB | 2840 | 8743;8744;8745 | chr2:178770183;178770182;178770181 | chr2:179634910;179634909;179634908 |
N2A | 2840 | 8743;8744;8745 | chr2:178770183;178770182;178770181 | chr2:179634910;179634909;179634908 |
N2B | 2794 | 8605;8606;8607 | chr2:178770183;178770182;178770181 | chr2:179634910;179634909;179634908 |
Novex-1 | 2794 | 8605;8606;8607 | chr2:178770183;178770182;178770181 | chr2:179634910;179634909;179634908 |
Novex-2 | 2794 | 8605;8606;8607 | chr2:178770183;178770182;178770181 | chr2:179634910;179634909;179634908 |
Novex-3 | 2840 | 8743;8744;8745 | chr2:178770183;178770182;178770181 | chr2:179634910;179634909;179634908 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.784 | N | 0.477 | 0.373 | 0.253726318573 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.6583 | likely_pathogenic | 0.661 | pathogenic | -1.441 | Destabilizing | 0.495 | N | 0.335 | neutral | None | None | None | None | N |
H/C | 0.1781 | likely_benign | 0.1717 | benign | -0.662 | Destabilizing | 0.003 | N | 0.335 | neutral | None | None | None | None | N |
H/D | 0.7458 | likely_pathogenic | 0.7675 | pathogenic | -1.316 | Destabilizing | 0.917 | D | 0.515 | neutral | D | 0.54045825 | None | None | N |
H/E | 0.7054 | likely_pathogenic | 0.7153 | pathogenic | -1.143 | Destabilizing | 0.828 | D | 0.425 | neutral | None | None | None | None | N |
H/F | 0.2367 | likely_benign | 0.2527 | benign | 0.351 | Stabilizing | 0.543 | D | 0.495 | neutral | None | None | None | None | N |
H/G | 0.7627 | likely_pathogenic | 0.7585 | pathogenic | -1.875 | Destabilizing | 0.828 | D | 0.488 | neutral | None | None | None | None | N |
H/I | 0.3634 | ambiguous | 0.3572 | ambiguous | -0.18 | Destabilizing | 0.543 | D | 0.51 | neutral | None | None | None | None | N |
H/K | 0.6436 | likely_pathogenic | 0.6447 | pathogenic | -1.068 | Destabilizing | 0.828 | D | 0.47 | neutral | None | None | None | None | N |
H/L | 0.2051 | likely_benign | 0.1929 | benign | -0.18 | Destabilizing | 0.27 | N | 0.359 | neutral | N | 0.486991097 | None | None | N |
H/M | 0.5908 | likely_pathogenic | 0.5903 | pathogenic | -0.399 | Destabilizing | 0.944 | D | 0.507 | neutral | None | None | None | None | N |
H/N | 0.2506 | likely_benign | 0.2802 | benign | -1.509 | Destabilizing | 0.784 | D | 0.44 | neutral | N | 0.510762249 | None | None | N |
H/P | 0.8611 | likely_pathogenic | 0.8196 | pathogenic | -0.586 | Destabilizing | 0.975 | D | 0.559 | neutral | N | 0.510955798 | None | None | N |
H/Q | 0.405 | ambiguous | 0.4275 | ambiguous | -1.102 | Destabilizing | 0.975 | D | 0.489 | neutral | N | 0.510762249 | None | None | N |
H/R | 0.3581 | ambiguous | 0.3573 | ambiguous | -1.559 | Destabilizing | 0.784 | D | 0.477 | neutral | N | 0.510713645 | None | None | N |
H/S | 0.5497 | ambiguous | 0.5741 | pathogenic | -1.576 | Destabilizing | 0.828 | D | 0.52 | neutral | None | None | None | None | N |
H/T | 0.527 | ambiguous | 0.5406 | ambiguous | -1.283 | Destabilizing | 0.704 | D | 0.491 | neutral | None | None | None | None | N |
H/V | 0.3037 | likely_benign | 0.2943 | benign | -0.586 | Destabilizing | 0.013 | N | 0.353 | neutral | None | None | None | None | N |
H/W | 0.4473 | ambiguous | 0.436 | ambiguous | 0.815 | Stabilizing | 0.985 | D | 0.494 | neutral | None | None | None | None | N |
H/Y | 0.0621 | likely_benign | 0.0664 | benign | 0.708 | Stabilizing | 0.002 | N | 0.097 | neutral | N | 0.403218677 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.