Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28400 | 85423;85424;85425 | chr2:178560934;178560933;178560932 | chr2:179425661;179425660;179425659 |
N2AB | 26759 | 80500;80501;80502 | chr2:178560934;178560933;178560932 | chr2:179425661;179425660;179425659 |
N2A | 25832 | 77719;77720;77721 | chr2:178560934;178560933;178560932 | chr2:179425661;179425660;179425659 |
N2B | 19335 | 58228;58229;58230 | chr2:178560934;178560933;178560932 | chr2:179425661;179425660;179425659 |
Novex-1 | 19460 | 58603;58604;58605 | chr2:178560934;178560933;178560932 | chr2:179425661;179425660;179425659 |
Novex-2 | 19527 | 58804;58805;58806 | chr2:178560934;178560933;178560932 | chr2:179425661;179425660;179425659 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1179703111 | -0.678 | 0.003 | N | 0.199 | 0.156 | 0.401753679984 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/G | rs1179703111 | -0.678 | 0.003 | N | 0.199 | 0.156 | 0.401753679984 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1179703111 | -0.678 | 0.003 | N | 0.199 | 0.156 | 0.401753679984 | gnomAD-4.0.0 | 1.85904E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69516E-06 | 0 | 1.60108E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1366 | likely_benign | 0.129 | benign | -0.351 | Destabilizing | 0.012 | N | 0.16 | neutral | N | 0.477494263 | None | None | N |
E/C | 0.7952 | likely_pathogenic | 0.7857 | pathogenic | -0.187 | Destabilizing | 0.996 | D | 0.367 | neutral | None | None | None | None | N |
E/D | 0.1543 | likely_benign | 0.1477 | benign | -0.386 | Destabilizing | 0.472 | N | 0.299 | neutral | N | 0.480342567 | None | None | N |
E/F | 0.7352 | likely_pathogenic | 0.7297 | pathogenic | -0.127 | Destabilizing | 0.984 | D | 0.361 | neutral | None | None | None | None | N |
E/G | 0.1099 | likely_benign | 0.103 | benign | -0.566 | Destabilizing | 0.003 | N | 0.199 | neutral | N | 0.521535829 | None | None | N |
E/H | 0.4668 | ambiguous | 0.4411 | ambiguous | 0.128 | Stabilizing | 0.953 | D | 0.323 | neutral | None | None | None | None | N |
E/I | 0.3738 | ambiguous | 0.351 | ambiguous | 0.188 | Stabilizing | 0.953 | D | 0.379 | neutral | None | None | None | None | N |
E/K | 0.122 | likely_benign | 0.1067 | benign | 0.199 | Stabilizing | 0.521 | D | 0.301 | neutral | N | 0.486113746 | None | None | N |
E/L | 0.3673 | ambiguous | 0.3418 | ambiguous | 0.188 | Stabilizing | 0.742 | D | 0.371 | neutral | None | None | None | None | N |
E/M | 0.4486 | ambiguous | 0.4274 | ambiguous | 0.175 | Stabilizing | 0.987 | D | 0.342 | neutral | None | None | None | None | N |
E/N | 0.2454 | likely_benign | 0.2347 | benign | -0.164 | Destabilizing | 0.742 | D | 0.289 | neutral | None | None | None | None | N |
E/P | 0.2884 | likely_benign | 0.2741 | benign | 0.029 | Stabilizing | 0.953 | D | 0.329 | neutral | None | None | None | None | N |
E/Q | 0.1391 | likely_benign | 0.1248 | benign | -0.108 | Destabilizing | 0.028 | N | 0.177 | neutral | N | 0.486921823 | None | None | N |
E/R | 0.2167 | likely_benign | 0.1948 | benign | 0.471 | Stabilizing | 0.59 | D | 0.286 | neutral | None | None | None | None | N |
E/S | 0.1861 | likely_benign | 0.1831 | benign | -0.327 | Destabilizing | 0.373 | N | 0.304 | neutral | None | None | None | None | N |
E/T | 0.2044 | likely_benign | 0.1996 | benign | -0.151 | Destabilizing | 0.742 | D | 0.331 | neutral | None | None | None | None | N |
E/V | 0.21 | likely_benign | 0.1981 | benign | 0.029 | Stabilizing | 0.684 | D | 0.353 | neutral | D | 0.529981954 | None | None | N |
E/W | 0.8564 | likely_pathogenic | 0.8351 | pathogenic | 0.037 | Stabilizing | 0.996 | D | 0.391 | neutral | None | None | None | None | N |
E/Y | 0.5783 | likely_pathogenic | 0.5586 | ambiguous | 0.114 | Stabilizing | 0.984 | D | 0.349 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.