Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28405 | 85438;85439;85440 | chr2:178560919;178560918;178560917 | chr2:179425646;179425645;179425644 |
N2AB | 26764 | 80515;80516;80517 | chr2:178560919;178560918;178560917 | chr2:179425646;179425645;179425644 |
N2A | 25837 | 77734;77735;77736 | chr2:178560919;178560918;178560917 | chr2:179425646;179425645;179425644 |
N2B | 19340 | 58243;58244;58245 | chr2:178560919;178560918;178560917 | chr2:179425646;179425645;179425644 |
Novex-1 | 19465 | 58618;58619;58620 | chr2:178560919;178560918;178560917 | chr2:179425646;179425645;179425644 |
Novex-2 | 19532 | 58819;58820;58821 | chr2:178560919;178560918;178560917 | chr2:179425646;179425645;179425644 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | None | None | 0.988 | N | 0.785 | 0.471 | 0.693353280975 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2131 | likely_benign | 0.2087 | benign | -0.979 | Destabilizing | 0.958 | D | 0.543 | neutral | N | 0.494517874 | None | None | N |
E/C | 0.8873 | likely_pathogenic | 0.8853 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/D | 0.1887 | likely_benign | 0.1874 | benign | -1.134 | Destabilizing | 0.958 | D | 0.413 | neutral | N | 0.489428993 | None | None | N |
E/F | 0.841 | likely_pathogenic | 0.8269 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/G | 0.2648 | likely_benign | 0.2402 | benign | -1.332 | Destabilizing | 0.988 | D | 0.687 | prob.neutral | N | 0.504432602 | None | None | N |
E/H | 0.498 | ambiguous | 0.4798 | ambiguous | -0.941 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/I | 0.4435 | ambiguous | 0.4412 | ambiguous | -0.017 | Destabilizing | 0.995 | D | 0.843 | deleterious | None | None | None | None | N |
E/K | 0.1693 | likely_benign | 0.153 | benign | -0.527 | Destabilizing | 0.919 | D | 0.443 | neutral | N | 0.478126194 | None | None | N |
E/L | 0.5629 | ambiguous | 0.5478 | ambiguous | -0.017 | Destabilizing | 0.991 | D | 0.799 | deleterious | None | None | None | None | N |
E/M | 0.5244 | ambiguous | 0.5141 | ambiguous | 0.494 | Stabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
E/N | 0.3039 | likely_benign | 0.3068 | benign | -0.966 | Destabilizing | 0.991 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/P | 0.9675 | likely_pathogenic | 0.9635 | pathogenic | -0.317 | Destabilizing | 0.995 | D | 0.813 | deleterious | None | None | None | None | N |
E/Q | 0.1509 | likely_benign | 0.1479 | benign | -0.851 | Destabilizing | 0.414 | N | 0.253 | neutral | N | 0.495501234 | None | None | N |
E/R | 0.3034 | likely_benign | 0.2773 | benign | -0.387 | Destabilizing | 0.982 | D | 0.671 | neutral | None | None | None | None | N |
E/S | 0.2402 | likely_benign | 0.2461 | benign | -1.302 | Destabilizing | 0.968 | D | 0.534 | neutral | None | None | None | None | N |
E/T | 0.2423 | likely_benign | 0.2481 | benign | -0.997 | Destabilizing | 0.991 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/V | 0.2599 | likely_benign | 0.2574 | benign | -0.317 | Destabilizing | 0.988 | D | 0.785 | deleterious | N | 0.519167527 | None | None | N |
E/W | 0.9447 | likely_pathogenic | 0.9324 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/Y | 0.7363 | likely_pathogenic | 0.7073 | pathogenic | -0.344 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.