Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28414 | 85465;85466;85467 | chr2:178560892;178560891;178560890 | chr2:179425619;179425618;179425617 |
N2AB | 26773 | 80542;80543;80544 | chr2:178560892;178560891;178560890 | chr2:179425619;179425618;179425617 |
N2A | 25846 | 77761;77762;77763 | chr2:178560892;178560891;178560890 | chr2:179425619;179425618;179425617 |
N2B | 19349 | 58270;58271;58272 | chr2:178560892;178560891;178560890 | chr2:179425619;179425618;179425617 |
Novex-1 | 19474 | 58645;58646;58647 | chr2:178560892;178560891;178560890 | chr2:179425619;179425618;179425617 |
Novex-2 | 19541 | 58846;58847;58848 | chr2:178560892;178560891;178560890 | chr2:179425619;179425618;179425617 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs775228620 | -2.587 | None | N | 0.38 | 0.131 | 0.289474373501 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
L/S | rs775228620 | -2.587 | None | N | 0.38 | 0.131 | 0.289474373501 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/S | rs775228620 | -2.587 | None | N | 0.38 | 0.131 | 0.289474373501 | gnomAD-4.0.0 | 6.57108E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4699E-05 | 0 | 0 |
L/W | None | None | 0.828 | N | 0.593 | 0.225 | 0.591025817267 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1053 | likely_benign | 0.1183 | benign | -2.678 | Highly Destabilizing | None | N | 0.271 | neutral | None | None | None | None | I |
L/C | 0.2376 | likely_benign | 0.2563 | benign | -1.985 | Destabilizing | 0.356 | N | 0.563 | neutral | None | None | None | None | I |
L/D | 0.491 | ambiguous | 0.4959 | ambiguous | -3.292 | Highly Destabilizing | 0.072 | N | 0.529 | neutral | None | None | None | None | I |
L/E | 0.2081 | likely_benign | 0.2208 | benign | -3.12 | Highly Destabilizing | 0.038 | N | 0.482 | neutral | None | None | None | None | I |
L/F | 0.1001 | likely_benign | 0.0955 | benign | -1.602 | Destabilizing | 0.055 | N | 0.529 | neutral | N | 0.513894993 | None | None | I |
L/G | 0.3656 | ambiguous | 0.3767 | ambiguous | -3.156 | Highly Destabilizing | 0.016 | N | 0.433 | neutral | None | None | None | None | I |
L/H | 0.1292 | likely_benign | 0.1287 | benign | -2.613 | Highly Destabilizing | 0.356 | N | 0.587 | neutral | None | None | None | None | I |
L/I | 0.0621 | likely_benign | 0.0615 | benign | -1.299 | Destabilizing | 0.006 | N | 0.375 | neutral | None | None | None | None | I |
L/K | 0.1854 | likely_benign | 0.2049 | benign | -2.113 | Highly Destabilizing | 0.038 | N | 0.473 | neutral | None | None | None | None | I |
L/M | 0.0692 | likely_benign | 0.069 | benign | -1.208 | Destabilizing | 0.002 | N | 0.375 | neutral | N | 0.481918648 | None | None | I |
L/N | 0.2027 | likely_benign | 0.2146 | benign | -2.37 | Highly Destabilizing | 0.038 | N | 0.538 | neutral | None | None | None | None | I |
L/P | 0.9507 | likely_pathogenic | 0.9475 | pathogenic | -1.741 | Destabilizing | 0.072 | N | 0.585 | neutral | None | None | None | None | I |
L/Q | 0.0946 | likely_benign | 0.096 | benign | -2.307 | Highly Destabilizing | 0.214 | N | 0.609 | neutral | None | None | None | None | I |
L/R | 0.1478 | likely_benign | 0.1547 | benign | -1.69 | Destabilizing | 0.072 | N | 0.585 | neutral | None | None | None | None | I |
L/S | 0.1029 | likely_benign | 0.1092 | benign | -2.961 | Highly Destabilizing | None | N | 0.38 | neutral | N | 0.404724514 | None | None | I |
L/T | 0.0723 | likely_benign | 0.0821 | benign | -2.669 | Highly Destabilizing | None | N | 0.267 | neutral | None | None | None | None | I |
L/V | 0.0624 | likely_benign | 0.0612 | benign | -1.741 | Destabilizing | None | N | 0.173 | neutral | N | 0.410287836 | None | None | I |
L/W | 0.2129 | likely_benign | 0.1961 | benign | -2.051 | Highly Destabilizing | 0.828 | D | 0.593 | neutral | N | 0.487618567 | None | None | I |
L/Y | 0.2042 | likely_benign | 0.2004 | benign | -1.838 | Destabilizing | 0.356 | N | 0.578 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.