Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28417 | 85474;85475;85476 | chr2:178560883;178560882;178560881 | chr2:179425610;179425609;179425608 |
N2AB | 26776 | 80551;80552;80553 | chr2:178560883;178560882;178560881 | chr2:179425610;179425609;179425608 |
N2A | 25849 | 77770;77771;77772 | chr2:178560883;178560882;178560881 | chr2:179425610;179425609;179425608 |
N2B | 19352 | 58279;58280;58281 | chr2:178560883;178560882;178560881 | chr2:179425610;179425609;179425608 |
Novex-1 | 19477 | 58654;58655;58656 | chr2:178560883;178560882;178560881 | chr2:179425610;179425609;179425608 |
Novex-2 | 19544 | 58855;58856;58857 | chr2:178560883;178560882;178560881 | chr2:179425610;179425609;179425608 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.892 | D | 0.612 | 0.608 | 0.729265719692 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6636 | likely_pathogenic | 0.6153 | pathogenic | -2.145 | Highly Destabilizing | 0.892 | D | 0.612 | neutral | D | 0.529818239 | None | None | N |
V/C | 0.8908 | likely_pathogenic | 0.8722 | pathogenic | -1.784 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
V/D | 0.9334 | likely_pathogenic | 0.9086 | pathogenic | -2.786 | Highly Destabilizing | 0.994 | D | 0.814 | deleterious | D | 0.530578708 | None | None | N |
V/E | 0.8542 | likely_pathogenic | 0.8122 | pathogenic | -2.675 | Highly Destabilizing | 0.996 | D | 0.798 | deleterious | None | None | None | None | N |
V/F | 0.4515 | ambiguous | 0.4247 | ambiguous | -1.43 | Destabilizing | 0.967 | D | 0.761 | deleterious | N | 0.502724309 | None | None | N |
V/G | 0.7488 | likely_pathogenic | 0.6987 | pathogenic | -2.588 | Highly Destabilizing | 0.983 | D | 0.811 | deleterious | D | 0.530578708 | None | None | N |
V/H | 0.927 | likely_pathogenic | 0.9014 | pathogenic | -2.185 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
V/I | 0.0823 | likely_benign | 0.0797 | benign | -0.952 | Destabilizing | 0.025 | N | 0.281 | neutral | N | 0.390645204 | None | None | N |
V/K | 0.8481 | likely_pathogenic | 0.803 | pathogenic | -1.919 | Destabilizing | 0.987 | D | 0.799 | deleterious | None | None | None | None | N |
V/L | 0.3042 | likely_benign | 0.2968 | benign | -0.952 | Destabilizing | 0.369 | N | 0.531 | neutral | D | 0.524514632 | None | None | N |
V/M | 0.2677 | likely_benign | 0.2505 | benign | -0.866 | Destabilizing | 0.975 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/N | 0.8271 | likely_pathogenic | 0.7621 | pathogenic | -2.009 | Highly Destabilizing | 0.996 | D | 0.836 | deleterious | None | None | None | None | N |
V/P | 0.9833 | likely_pathogenic | 0.9815 | pathogenic | -1.32 | Destabilizing | 0.996 | D | 0.801 | deleterious | None | None | None | None | N |
V/Q | 0.8136 | likely_pathogenic | 0.7682 | pathogenic | -2.045 | Highly Destabilizing | 0.996 | D | 0.826 | deleterious | None | None | None | None | N |
V/R | 0.7973 | likely_pathogenic | 0.7553 | pathogenic | -1.465 | Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
V/S | 0.7669 | likely_pathogenic | 0.7064 | pathogenic | -2.567 | Highly Destabilizing | 0.987 | D | 0.796 | deleterious | None | None | None | None | N |
V/T | 0.7306 | likely_pathogenic | 0.6574 | pathogenic | -2.337 | Highly Destabilizing | 0.916 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/W | 0.9608 | likely_pathogenic | 0.9492 | pathogenic | -1.828 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
V/Y | 0.8556 | likely_pathogenic | 0.8384 | pathogenic | -1.539 | Destabilizing | 0.987 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.