Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28418 | 85477;85478;85479 | chr2:178560880;178560879;178560878 | chr2:179425607;179425606;179425605 |
N2AB | 26777 | 80554;80555;80556 | chr2:178560880;178560879;178560878 | chr2:179425607;179425606;179425605 |
N2A | 25850 | 77773;77774;77775 | chr2:178560880;178560879;178560878 | chr2:179425607;179425606;179425605 |
N2B | 19353 | 58282;58283;58284 | chr2:178560880;178560879;178560878 | chr2:179425607;179425606;179425605 |
Novex-1 | 19478 | 58657;58658;58659 | chr2:178560880;178560879;178560878 | chr2:179425607;179425606;179425605 |
Novex-2 | 19545 | 58858;58859;58860 | chr2:178560880;178560879;178560878 | chr2:179425607;179425606;179425605 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.92 | D | 0.386 | 0.323 | 0.426318900417 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85811E-06 | 0 | 0 |
K/N | rs759051213 | -0.884 | 0.959 | D | 0.371 | 0.297 | 0.215109475489 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/N | rs759051213 | -0.884 | 0.959 | D | 0.371 | 0.297 | 0.215109475489 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6719 | likely_pathogenic | 0.6723 | pathogenic | -0.468 | Destabilizing | 0.863 | D | 0.371 | neutral | None | None | None | None | N |
K/C | 0.8779 | likely_pathogenic | 0.8708 | pathogenic | -0.661 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
K/D | 0.8674 | likely_pathogenic | 0.8593 | pathogenic | -0.465 | Destabilizing | 0.969 | D | 0.424 | neutral | None | None | None | None | N |
K/E | 0.4135 | ambiguous | 0.3929 | ambiguous | -0.396 | Destabilizing | 0.92 | D | 0.386 | neutral | D | 0.530864601 | None | None | N |
K/F | 0.9329 | likely_pathogenic | 0.9192 | pathogenic | -0.456 | Destabilizing | 0.997 | D | 0.58 | neutral | None | None | None | None | N |
K/G | 0.7342 | likely_pathogenic | 0.7494 | pathogenic | -0.787 | Destabilizing | 0.969 | D | 0.464 | neutral | None | None | None | None | N |
K/H | 0.5044 | ambiguous | 0.4853 | ambiguous | -1.231 | Destabilizing | 0.997 | D | 0.487 | neutral | None | None | None | None | N |
K/I | 0.6916 | likely_pathogenic | 0.6516 | pathogenic | 0.334 | Stabilizing | 0.976 | D | 0.572 | neutral | N | 0.503382646 | None | None | N |
K/L | 0.6575 | likely_pathogenic | 0.6362 | pathogenic | 0.334 | Stabilizing | 0.939 | D | 0.449 | neutral | None | None | None | None | N |
K/M | 0.4642 | ambiguous | 0.4477 | ambiguous | 0.371 | Stabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | N |
K/N | 0.7393 | likely_pathogenic | 0.73 | pathogenic | -0.432 | Destabilizing | 0.959 | D | 0.371 | neutral | D | 0.531731393 | None | None | N |
K/P | 0.8781 | likely_pathogenic | 0.8915 | pathogenic | 0.097 | Stabilizing | 0.997 | D | 0.452 | neutral | None | None | None | None | N |
K/Q | 0.2721 | likely_benign | 0.2668 | benign | -0.663 | Destabilizing | 0.92 | D | 0.431 | neutral | N | 0.484692052 | None | None | N |
K/R | 0.0973 | likely_benign | 0.0948 | benign | -0.489 | Destabilizing | 0.015 | N | 0.081 | neutral | N | 0.459023145 | None | None | N |
K/S | 0.7189 | likely_pathogenic | 0.7195 | pathogenic | -1.044 | Destabilizing | 0.884 | D | 0.334 | neutral | None | None | None | None | N |
K/T | 0.3657 | ambiguous | 0.3544 | ambiguous | -0.788 | Destabilizing | 0.134 | N | 0.275 | neutral | D | 0.522399833 | None | None | N |
K/V | 0.6558 | likely_pathogenic | 0.635 | pathogenic | 0.097 | Stabilizing | 0.939 | D | 0.464 | neutral | None | None | None | None | N |
K/W | 0.8673 | likely_pathogenic | 0.8507 | pathogenic | -0.341 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
K/Y | 0.8462 | likely_pathogenic | 0.8264 | pathogenic | 0.022 | Stabilizing | 0.997 | D | 0.552 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.