Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28425 | 85498;85499;85500 | chr2:178560859;178560858;178560857 | chr2:179425586;179425585;179425584 |
N2AB | 26784 | 80575;80576;80577 | chr2:178560859;178560858;178560857 | chr2:179425586;179425585;179425584 |
N2A | 25857 | 77794;77795;77796 | chr2:178560859;178560858;178560857 | chr2:179425586;179425585;179425584 |
N2B | 19360 | 58303;58304;58305 | chr2:178560859;178560858;178560857 | chr2:179425586;179425585;179425584 |
Novex-1 | 19485 | 58678;58679;58680 | chr2:178560859;178560858;178560857 | chr2:179425586;179425585;179425584 |
Novex-2 | 19552 | 58879;58880;58881 | chr2:178560859;178560858;178560857 | chr2:179425586;179425585;179425584 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.012 | N | 0.258 | 0.079 | 0.0806252709748 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.092 | likely_benign | 0.0957 | benign | -0.698 | Destabilizing | 0.012 | N | 0.258 | neutral | N | 0.460983228 | None | None | I |
T/C | 0.4364 | ambiguous | 0.4648 | ambiguous | -0.34 | Destabilizing | 0.824 | D | 0.492 | neutral | None | None | None | None | I |
T/D | 0.6116 | likely_pathogenic | 0.6151 | pathogenic | -0.217 | Destabilizing | 0.081 | N | 0.453 | neutral | None | None | None | None | I |
T/E | 0.6173 | likely_pathogenic | 0.6003 | pathogenic | -0.255 | Destabilizing | 0.081 | N | 0.462 | neutral | None | None | None | None | I |
T/F | 0.6054 | likely_pathogenic | 0.5905 | pathogenic | -0.955 | Destabilizing | 0.555 | D | 0.579 | neutral | None | None | None | None | I |
T/G | 0.133 | likely_benign | 0.1425 | benign | -0.908 | Destabilizing | 0.035 | N | 0.415 | neutral | None | None | None | None | I |
T/H | 0.4135 | ambiguous | 0.416 | ambiguous | -1.245 | Destabilizing | 0.555 | D | 0.555 | neutral | None | None | None | None | I |
T/I | 0.6712 | likely_pathogenic | 0.6464 | pathogenic | -0.244 | Destabilizing | 0.117 | N | 0.509 | neutral | N | 0.495113759 | None | None | I |
T/K | 0.397 | ambiguous | 0.374 | ambiguous | -0.649 | Destabilizing | 0.081 | N | 0.456 | neutral | None | None | None | None | I |
T/L | 0.2936 | likely_benign | 0.2835 | benign | -0.244 | Destabilizing | 0.149 | N | 0.463 | neutral | None | None | None | None | I |
T/M | 0.1849 | likely_benign | 0.1854 | benign | 0.195 | Stabilizing | 0.791 | D | 0.5 | neutral | None | None | None | None | I |
T/N | 0.2057 | likely_benign | 0.2117 | benign | -0.491 | Destabilizing | 0.062 | N | 0.361 | neutral | D | 0.525920141 | None | None | I |
T/P | 0.6112 | likely_pathogenic | 0.6024 | pathogenic | -0.365 | Destabilizing | 0.117 | N | 0.493 | neutral | N | 0.483757453 | None | None | I |
T/Q | 0.4078 | ambiguous | 0.3994 | ambiguous | -0.749 | Destabilizing | 0.38 | N | 0.515 | neutral | None | None | None | None | I |
T/R | 0.2725 | likely_benign | 0.2621 | benign | -0.345 | Destabilizing | 0.38 | N | 0.514 | neutral | None | None | None | None | I |
T/S | 0.0771 | likely_benign | 0.0816 | benign | -0.751 | Destabilizing | None | N | 0.108 | neutral | N | 0.392950082 | None | None | I |
T/V | 0.4833 | ambiguous | 0.4658 | ambiguous | -0.365 | Destabilizing | 0.149 | N | 0.356 | neutral | None | None | None | None | I |
T/W | 0.8336 | likely_pathogenic | 0.8399 | pathogenic | -0.886 | Destabilizing | 0.935 | D | 0.578 | neutral | None | None | None | None | I |
T/Y | 0.4988 | ambiguous | 0.5092 | ambiguous | -0.65 | Destabilizing | 0.555 | D | 0.576 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.