Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28431 | 85516;85517;85518 | chr2:178560841;178560840;178560839 | chr2:179425568;179425567;179425566 |
N2AB | 26790 | 80593;80594;80595 | chr2:178560841;178560840;178560839 | chr2:179425568;179425567;179425566 |
N2A | 25863 | 77812;77813;77814 | chr2:178560841;178560840;178560839 | chr2:179425568;179425567;179425566 |
N2B | 19366 | 58321;58322;58323 | chr2:178560841;178560840;178560839 | chr2:179425568;179425567;179425566 |
Novex-1 | 19491 | 58696;58697;58698 | chr2:178560841;178560840;178560839 | chr2:179425568;179425567;179425566 |
Novex-2 | 19558 | 58897;58898;58899 | chr2:178560841;178560840;178560839 | chr2:179425568;179425567;179425566 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs780326294 | -0.142 | 1.0 | N | 0.849 | 0.455 | 0.586235444834 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1749 | likely_benign | 0.1655 | benign | -1.152 | Destabilizing | 0.999 | D | 0.652 | neutral | N | 0.48721372 | None | None | N |
T/C | 0.4589 | ambiguous | 0.4597 | ambiguous | -0.833 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
T/D | 0.6871 | likely_pathogenic | 0.6476 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
T/E | 0.4728 | ambiguous | 0.4452 | ambiguous | -0.72 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
T/F | 0.2686 | likely_benign | 0.2506 | benign | -0.956 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
T/G | 0.5171 | ambiguous | 0.4823 | ambiguous | -1.508 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
T/H | 0.2652 | likely_benign | 0.2455 | benign | -1.693 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
T/I | 0.1754 | likely_benign | 0.1719 | benign | -0.253 | Destabilizing | 1.0 | D | 0.849 | deleterious | N | 0.496522741 | None | None | N |
T/K | 0.3137 | likely_benign | 0.304 | benign | -0.642 | Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.473355093 | None | None | N |
T/L | 0.1073 | likely_benign | 0.1078 | benign | -0.253 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
T/M | 0.0979 | likely_benign | 0.1024 | benign | -0.128 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
T/N | 0.199 | likely_benign | 0.1795 | benign | -0.973 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
T/P | 0.782 | likely_pathogenic | 0.7698 | pathogenic | -0.52 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.524778583 | None | None | N |
T/Q | 0.2749 | likely_benign | 0.2642 | benign | -0.953 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
T/R | 0.2499 | likely_benign | 0.2375 | benign | -0.671 | Destabilizing | 1.0 | D | 0.854 | deleterious | N | 0.496560026 | None | None | N |
T/S | 0.1748 | likely_benign | 0.1644 | benign | -1.278 | Destabilizing | 0.999 | D | 0.637 | neutral | N | 0.498061536 | None | None | N |
T/V | 0.1591 | likely_benign | 0.1652 | benign | -0.52 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | N |
T/W | 0.6209 | likely_pathogenic | 0.5885 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
T/Y | 0.2821 | likely_benign | 0.2622 | benign | -0.646 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.