Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28444 | 85555;85556;85557 | chr2:178560802;178560801;178560800 | chr2:179425529;179425528;179425527 |
N2AB | 26803 | 80632;80633;80634 | chr2:178560802;178560801;178560800 | chr2:179425529;179425528;179425527 |
N2A | 25876 | 77851;77852;77853 | chr2:178560802;178560801;178560800 | chr2:179425529;179425528;179425527 |
N2B | 19379 | 58360;58361;58362 | chr2:178560802;178560801;178560800 | chr2:179425529;179425528;179425527 |
Novex-1 | 19504 | 58735;58736;58737 | chr2:178560802;178560801;178560800 | chr2:179425529;179425528;179425527 |
Novex-2 | 19571 | 58936;58937;58938 | chr2:178560802;178560801;178560800 | chr2:179425529;179425528;179425527 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.958 | N | 0.61 | 0.382 | 0.362758974969 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2889 | likely_benign | 0.2847 | benign | -0.876 | Destabilizing | 0.968 | D | 0.683 | prob.neutral | None | None | None | None | I |
N/C | 0.2924 | likely_benign | 0.2949 | benign | 0.017 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
N/D | 0.2532 | likely_benign | 0.2263 | benign | -0.512 | Destabilizing | 0.958 | D | 0.61 | neutral | N | 0.500113735 | None | None | I |
N/E | 0.527 | ambiguous | 0.4795 | ambiguous | -0.46 | Destabilizing | 0.968 | D | 0.639 | neutral | None | None | None | None | I |
N/F | 0.5226 | ambiguous | 0.4879 | ambiguous | -0.819 | Destabilizing | 0.995 | D | 0.739 | prob.delet. | None | None | None | None | I |
N/G | 0.402 | ambiguous | 0.396 | ambiguous | -1.169 | Destabilizing | 0.968 | D | 0.584 | neutral | None | None | None | None | I |
N/H | 0.0999 | likely_benign | 0.0946 | benign | -1.018 | Destabilizing | 0.142 | N | 0.35 | neutral | D | 0.52526678 | None | None | I |
N/I | 0.1869 | likely_benign | 0.1781 | benign | -0.149 | Destabilizing | 0.994 | D | 0.747 | deleterious | N | 0.491657492 | None | None | I |
N/K | 0.3318 | likely_benign | 0.2915 | benign | -0.227 | Destabilizing | 0.958 | D | 0.656 | neutral | N | 0.515548432 | None | None | I |
N/L | 0.2259 | likely_benign | 0.2118 | benign | -0.149 | Destabilizing | 0.991 | D | 0.735 | prob.delet. | None | None | None | None | I |
N/M | 0.3438 | ambiguous | 0.3344 | benign | 0.406 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
N/P | 0.6027 | likely_pathogenic | 0.5576 | ambiguous | -0.363 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | I |
N/Q | 0.3551 | ambiguous | 0.3331 | benign | -0.881 | Destabilizing | 0.991 | D | 0.703 | prob.neutral | None | None | None | None | I |
N/R | 0.3428 | ambiguous | 0.2949 | benign | -0.184 | Destabilizing | 0.991 | D | 0.671 | neutral | None | None | None | None | I |
N/S | 0.1033 | likely_benign | 0.1022 | benign | -0.761 | Destabilizing | 0.958 | D | 0.583 | neutral | N | 0.502464491 | None | None | I |
N/T | 0.134 | likely_benign | 0.1303 | benign | -0.528 | Destabilizing | 0.979 | D | 0.659 | neutral | N | 0.47389381 | None | None | I |
N/V | 0.2258 | likely_benign | 0.2165 | benign | -0.363 | Destabilizing | 0.995 | D | 0.739 | prob.delet. | None | None | None | None | I |
N/W | 0.7586 | likely_pathogenic | 0.7344 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
N/Y | 0.1582 | likely_benign | 0.1446 | benign | -0.381 | Destabilizing | 0.976 | D | 0.73 | prob.delet. | N | 0.506154123 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.