Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28475 | 85648;85649;85650 | chr2:178560709;178560708;178560707 | chr2:179425436;179425435;179425434 |
N2AB | 26834 | 80725;80726;80727 | chr2:178560709;178560708;178560707 | chr2:179425436;179425435;179425434 |
N2A | 25907 | 77944;77945;77946 | chr2:178560709;178560708;178560707 | chr2:179425436;179425435;179425434 |
N2B | 19410 | 58453;58454;58455 | chr2:178560709;178560708;178560707 | chr2:179425436;179425435;179425434 |
Novex-1 | 19535 | 58828;58829;58830 | chr2:178560709;178560708;178560707 | chr2:179425436;179425435;179425434 |
Novex-2 | 19602 | 59029;59030;59031 | chr2:178560709;178560708;178560707 | chr2:179425436;179425435;179425434 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.978 | D | 0.881 | 0.562 | 0.891450760401 | gnomAD-4.0.0 | 2.73718E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59787E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6787 | likely_pathogenic | 0.6641 | pathogenic | -1.861 | Destabilizing | 0.865 | D | 0.685 | prob.neutral | D | 0.60968895 | None | None | N |
P/C | 0.9401 | likely_pathogenic | 0.924 | pathogenic | -1.213 | Destabilizing | 0.999 | D | 0.892 | deleterious | None | None | None | None | N |
P/D | 0.9927 | likely_pathogenic | 0.9927 | pathogenic | -1.906 | Destabilizing | 0.983 | D | 0.831 | deleterious | None | None | None | None | N |
P/E | 0.9772 | likely_pathogenic | 0.978 | pathogenic | -1.866 | Destabilizing | 0.983 | D | 0.828 | deleterious | None | None | None | None | N |
P/F | 0.9923 | likely_pathogenic | 0.9907 | pathogenic | -1.364 | Destabilizing | 0.998 | D | 0.904 | deleterious | None | None | None | None | N |
P/G | 0.9633 | likely_pathogenic | 0.9568 | pathogenic | -2.239 | Highly Destabilizing | 0.895 | D | 0.799 | deleterious | None | None | None | None | N |
P/H | 0.9601 | likely_pathogenic | 0.9575 | pathogenic | -1.841 | Destabilizing | 0.997 | D | 0.897 | deleterious | D | 0.651851835 | None | None | N |
P/I | 0.9104 | likely_pathogenic | 0.9061 | pathogenic | -0.889 | Destabilizing | 0.992 | D | 0.889 | deleterious | None | None | None | None | N |
P/K | 0.9813 | likely_pathogenic | 0.9832 | pathogenic | -1.664 | Destabilizing | 0.968 | D | 0.831 | deleterious | None | None | None | None | N |
P/L | 0.7363 | likely_pathogenic | 0.734 | pathogenic | -0.889 | Destabilizing | 0.978 | D | 0.881 | deleterious | D | 0.650842814 | None | None | N |
P/M | 0.9554 | likely_pathogenic | 0.9461 | pathogenic | -0.628 | Destabilizing | 0.999 | D | 0.901 | deleterious | None | None | None | None | N |
P/N | 0.9849 | likely_pathogenic | 0.9845 | pathogenic | -1.452 | Destabilizing | 0.968 | D | 0.903 | deleterious | None | None | None | None | N |
P/Q | 0.9406 | likely_pathogenic | 0.9369 | pathogenic | -1.576 | Destabilizing | 0.983 | D | 0.857 | deleterious | None | None | None | None | N |
P/R | 0.9404 | likely_pathogenic | 0.9464 | pathogenic | -1.148 | Destabilizing | 0.978 | D | 0.887 | deleterious | D | 0.63563067 | None | None | N |
P/S | 0.8914 | likely_pathogenic | 0.8763 | pathogenic | -1.981 | Destabilizing | 0.284 | N | 0.563 | neutral | D | 0.58026476 | None | None | N |
P/T | 0.8358 | likely_pathogenic | 0.8192 | pathogenic | -1.827 | Destabilizing | 0.957 | D | 0.805 | deleterious | D | 0.635428866 | None | None | N |
P/V | 0.8228 | likely_pathogenic | 0.8145 | pathogenic | -1.18 | Destabilizing | 0.983 | D | 0.883 | deleterious | None | None | None | None | N |
P/W | 0.9959 | likely_pathogenic | 0.9951 | pathogenic | -1.621 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
P/Y | 0.9901 | likely_pathogenic | 0.9898 | pathogenic | -1.357 | Destabilizing | 0.999 | D | 0.903 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.