Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2848 | 8767;8768;8769 | chr2:178770159;178770158;178770157 | chr2:179634886;179634885;179634884 |
N2AB | 2848 | 8767;8768;8769 | chr2:178770159;178770158;178770157 | chr2:179634886;179634885;179634884 |
N2A | 2848 | 8767;8768;8769 | chr2:178770159;178770158;178770157 | chr2:179634886;179634885;179634884 |
N2B | 2802 | 8629;8630;8631 | chr2:178770159;178770158;178770157 | chr2:179634886;179634885;179634884 |
Novex-1 | 2802 | 8629;8630;8631 | chr2:178770159;178770158;178770157 | chr2:179634886;179634885;179634884 |
Novex-2 | 2802 | 8629;8630;8631 | chr2:178770159;178770158;178770157 | chr2:179634886;179634885;179634884 |
Novex-3 | 2848 | 8767;8768;8769 | chr2:178770159;178770158;178770157 | chr2:179634886;179634885;179634884 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.835 | N | 0.498 | 0.231 | 0.454987352986 | gnomAD-4.0.0 | 1.59046E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02133E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5206 | ambiguous | 0.5077 | ambiguous | -1.858 | Destabilizing | 0.122 | N | 0.216 | neutral | N | 0.4866082 | None | None | N |
V/C | 0.9022 | likely_pathogenic | 0.9171 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/D | 0.8799 | likely_pathogenic | 0.8589 | pathogenic | -2.247 | Highly Destabilizing | 0.994 | D | 0.784 | deleterious | N | 0.503775787 | None | None | N |
V/E | 0.7397 | likely_pathogenic | 0.7279 | pathogenic | -2.207 | Highly Destabilizing | 0.996 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/F | 0.4224 | ambiguous | 0.4299 | ambiguous | -1.343 | Destabilizing | 0.994 | D | 0.753 | deleterious | N | 0.512652949 | None | None | N |
V/G | 0.5676 | likely_pathogenic | 0.5513 | ambiguous | -2.215 | Highly Destabilizing | 0.925 | D | 0.721 | prob.delet. | N | 0.507473517 | None | None | N |
V/H | 0.8714 | likely_pathogenic | 0.8718 | pathogenic | -1.777 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
V/I | 0.0987 | likely_benign | 0.1126 | benign | -0.94 | Destabilizing | 0.248 | N | 0.24 | neutral | N | 0.506099526 | None | None | N |
V/K | 0.7928 | likely_pathogenic | 0.7852 | pathogenic | -1.587 | Destabilizing | 0.991 | D | 0.724 | prob.delet. | None | None | None | None | N |
V/L | 0.4364 | ambiguous | 0.5085 | ambiguous | -0.94 | Destabilizing | 0.835 | D | 0.498 | neutral | N | 0.494356381 | None | None | N |
V/M | 0.2694 | likely_benign | 0.3182 | benign | -0.718 | Destabilizing | 0.996 | D | 0.658 | neutral | None | None | None | None | N |
V/N | 0.6247 | likely_pathogenic | 0.6238 | pathogenic | -1.479 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
V/P | 0.9945 | likely_pathogenic | 0.9901 | pathogenic | -1.215 | Destabilizing | 0.996 | D | 0.755 | deleterious | None | None | None | None | N |
V/Q | 0.6528 | likely_pathogenic | 0.6503 | pathogenic | -1.63 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
V/R | 0.7673 | likely_pathogenic | 0.7357 | pathogenic | -1.045 | Destabilizing | 0.996 | D | 0.796 | deleterious | None | None | None | None | N |
V/S | 0.5606 | ambiguous | 0.5598 | ambiguous | -1.969 | Destabilizing | 0.942 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/T | 0.4116 | ambiguous | 0.4454 | ambiguous | -1.83 | Destabilizing | 0.97 | D | 0.587 | neutral | None | None | None | None | N |
V/W | 0.9594 | likely_pathogenic | 0.9575 | pathogenic | -1.635 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
V/Y | 0.8077 | likely_pathogenic | 0.8073 | pathogenic | -1.361 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.