Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2850 | 8773;8774;8775 | chr2:178770153;178770152;178770151 | chr2:179634880;179634879;179634878 |
N2AB | 2850 | 8773;8774;8775 | chr2:178770153;178770152;178770151 | chr2:179634880;179634879;179634878 |
N2A | 2850 | 8773;8774;8775 | chr2:178770153;178770152;178770151 | chr2:179634880;179634879;179634878 |
N2B | 2804 | 8635;8636;8637 | chr2:178770153;178770152;178770151 | chr2:179634880;179634879;179634878 |
Novex-1 | 2804 | 8635;8636;8637 | chr2:178770153;178770152;178770151 | chr2:179634880;179634879;179634878 |
Novex-2 | 2804 | 8635;8636;8637 | chr2:178770153;178770152;178770151 | chr2:179634880;179634879;179634878 |
Novex-3 | 2850 | 8773;8774;8775 | chr2:178770153;178770152;178770151 | chr2:179634880;179634879;179634878 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1396734796 | -1.068 | 0.999 | N | 0.625 | 0.331 | 0.341934017632 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/R | rs1396734796 | -1.068 | 0.999 | N | 0.625 | 0.331 | 0.341934017632 | gnomAD-4.0.0 | 1.59045E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9349 | likely_pathogenic | 0.9329 | pathogenic | -0.786 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/C | 0.941 | likely_pathogenic | 0.9431 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
K/D | 0.9891 | likely_pathogenic | 0.9865 | pathogenic | -1.179 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/E | 0.8534 | likely_pathogenic | 0.8409 | pathogenic | -0.997 | Destabilizing | 0.999 | D | 0.631 | neutral | D | 0.56120684 | None | None | N |
K/F | 0.9859 | likely_pathogenic | 0.9811 | pathogenic | -0.105 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
K/G | 0.9662 | likely_pathogenic | 0.9632 | pathogenic | -1.229 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
K/H | 0.6552 | likely_pathogenic | 0.6566 | pathogenic | -1.608 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
K/I | 0.8381 | likely_pathogenic | 0.8066 | pathogenic | 0.411 | Stabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
K/L | 0.8652 | likely_pathogenic | 0.8298 | pathogenic | 0.411 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
K/M | 0.731 | likely_pathogenic | 0.6892 | pathogenic | 0.222 | Stabilizing | 1.0 | D | 0.774 | deleterious | D | 0.549057148 | None | None | N |
K/N | 0.9454 | likely_pathogenic | 0.9401 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.513654969 | None | None | N |
K/P | 0.9984 | likely_pathogenic | 0.9974 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
K/Q | 0.4323 | ambiguous | 0.4544 | ambiguous | -1.211 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.511180986 | None | None | N |
K/R | 0.1228 | likely_benign | 0.1367 | benign | -1.286 | Destabilizing | 0.999 | D | 0.625 | neutral | N | 0.493088865 | None | None | N |
K/S | 0.9225 | likely_pathogenic | 0.9203 | pathogenic | -1.817 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
K/T | 0.617 | likely_pathogenic | 0.603 | pathogenic | -1.418 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.493746497 | None | None | N |
K/V | 0.8035 | likely_pathogenic | 0.7795 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
K/W | 0.974 | likely_pathogenic | 0.9687 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
K/Y | 0.9421 | likely_pathogenic | 0.9289 | pathogenic | 0.166 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.