Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2854 | 8785;8786;8787 | chr2:178770141;178770140;178770139 | chr2:179634868;179634867;179634866 |
N2AB | 2854 | 8785;8786;8787 | chr2:178770141;178770140;178770139 | chr2:179634868;179634867;179634866 |
N2A | 2854 | 8785;8786;8787 | chr2:178770141;178770140;178770139 | chr2:179634868;179634867;179634866 |
N2B | 2808 | 8647;8648;8649 | chr2:178770141;178770140;178770139 | chr2:179634868;179634867;179634866 |
Novex-1 | 2808 | 8647;8648;8649 | chr2:178770141;178770140;178770139 | chr2:179634868;179634867;179634866 |
Novex-2 | 2808 | 8647;8648;8649 | chr2:178770141;178770140;178770139 | chr2:179634868;179634867;179634866 |
Novex-3 | 2854 | 8785;8786;8787 | chr2:178770141;178770140;178770139 | chr2:179634868;179634867;179634866 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.028 | N | 0.164 | 0.271 | 0.238096912614 | gnomAD-4.0.0 | 6.84063E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65574E-05 |
Q/R | rs750346528 | None | 0.801 | N | 0.413 | 0.317 | 0.231873229951 | gnomAD-4.0.0 | 1.59047E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02133E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3253 | likely_benign | 0.4295 | ambiguous | -0.441 | Destabilizing | 0.842 | D | 0.344 | neutral | None | None | None | None | N |
Q/C | 0.7022 | likely_pathogenic | 0.8054 | pathogenic | 0.052 | Stabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | N |
Q/D | 0.4943 | ambiguous | 0.6427 | pathogenic | -1.014 | Destabilizing | 0.842 | D | 0.361 | neutral | None | None | None | None | N |
Q/E | 0.1129 | likely_benign | 0.1295 | benign | -0.918 | Destabilizing | 0.625 | D | 0.359 | neutral | N | 0.502341142 | None | None | N |
Q/F | 0.7722 | likely_pathogenic | 0.8625 | pathogenic | -0.254 | Destabilizing | 0.949 | D | 0.516 | neutral | None | None | None | None | N |
Q/G | 0.3581 | ambiguous | 0.456 | ambiguous | -0.799 | Destabilizing | 0.842 | D | 0.437 | neutral | None | None | None | None | N |
Q/H | 0.2271 | likely_benign | 0.3356 | benign | -0.878 | Destabilizing | 0.028 | N | 0.164 | neutral | N | 0.479643097 | None | None | N |
Q/I | 0.5408 | ambiguous | 0.6595 | pathogenic | 0.468 | Stabilizing | 0.904 | D | 0.464 | neutral | None | None | None | None | N |
Q/K | 0.1324 | likely_benign | 0.1591 | benign | -0.297 | Destabilizing | 0.801 | D | 0.382 | neutral | N | 0.494406951 | None | None | N |
Q/L | 0.1976 | likely_benign | 0.2625 | benign | 0.468 | Stabilizing | 0.012 | N | 0.253 | neutral | N | 0.504073255 | None | None | N |
Q/M | 0.4662 | ambiguous | 0.5781 | pathogenic | 0.991 | Stabilizing | 0.949 | D | 0.408 | neutral | None | None | None | None | N |
Q/N | 0.3395 | likely_benign | 0.4679 | ambiguous | -0.885 | Destabilizing | 0.842 | D | 0.353 | neutral | None | None | None | None | N |
Q/P | 0.3827 | ambiguous | 0.529 | ambiguous | 0.197 | Stabilizing | 0.989 | D | 0.432 | neutral | N | 0.510244506 | None | None | N |
Q/R | 0.1396 | likely_benign | 0.1604 | benign | -0.29 | Destabilizing | 0.801 | D | 0.413 | neutral | N | 0.494583541 | None | None | N |
Q/S | 0.3309 | likely_benign | 0.4211 | ambiguous | -0.904 | Destabilizing | 0.842 | D | 0.319 | neutral | None | None | None | None | N |
Q/T | 0.2911 | likely_benign | 0.3802 | ambiguous | -0.619 | Destabilizing | 0.915 | D | 0.383 | neutral | None | None | None | None | N |
Q/V | 0.3735 | ambiguous | 0.4758 | ambiguous | 0.197 | Stabilizing | 0.728 | D | 0.416 | neutral | None | None | None | None | N |
Q/W | 0.6328 | likely_pathogenic | 0.7274 | pathogenic | -0.21 | Destabilizing | 0.998 | D | 0.515 | neutral | None | None | None | None | N |
Q/Y | 0.5374 | ambiguous | 0.6837 | pathogenic | 0.08 | Stabilizing | 0.949 | D | 0.414 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.