Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28574 | 85945;85946;85947 | chr2:178560412;178560411;178560410 | chr2:179425139;179425138;179425137 |
N2AB | 26933 | 81022;81023;81024 | chr2:178560412;178560411;178560410 | chr2:179425139;179425138;179425137 |
N2A | 26006 | 78241;78242;78243 | chr2:178560412;178560411;178560410 | chr2:179425139;179425138;179425137 |
N2B | 19509 | 58750;58751;58752 | chr2:178560412;178560411;178560410 | chr2:179425139;179425138;179425137 |
Novex-1 | 19634 | 59125;59126;59127 | chr2:178560412;178560411;178560410 | chr2:179425139;179425138;179425137 |
Novex-2 | 19701 | 59326;59327;59328 | chr2:178560412;178560411;178560410 | chr2:179425139;179425138;179425137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.568 | N | 0.553 | 0.466 | 0.304108284078 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.8094 | likely_pathogenic | 0.7837 | pathogenic | -2.05 | Highly Destabilizing | 0.955 | D | 0.7 | prob.neutral | N | 0.501182783 | None | None | N |
P/C | 0.9806 | likely_pathogenic | 0.9753 | pathogenic | -1.771 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
P/D | 0.9967 | likely_pathogenic | 0.9957 | pathogenic | -2.698 | Highly Destabilizing | 0.995 | D | 0.827 | deleterious | None | None | None | None | N |
P/E | 0.9914 | likely_pathogenic | 0.9882 | pathogenic | -2.596 | Highly Destabilizing | 0.995 | D | 0.82 | deleterious | None | None | None | None | N |
P/F | 0.9984 | likely_pathogenic | 0.9976 | pathogenic | -1.488 | Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
P/G | 0.9736 | likely_pathogenic | 0.9663 | pathogenic | -2.488 | Highly Destabilizing | 0.966 | D | 0.805 | deleterious | None | None | None | None | N |
P/H | 0.9893 | likely_pathogenic | 0.9845 | pathogenic | -2.156 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.538405251 | None | None | N |
P/I | 0.9871 | likely_pathogenic | 0.9825 | pathogenic | -0.879 | Destabilizing | 0.998 | D | 0.893 | deleterious | None | None | None | None | N |
P/K | 0.9946 | likely_pathogenic | 0.992 | pathogenic | -1.769 | Destabilizing | 0.995 | D | 0.826 | deleterious | None | None | None | None | N |
P/L | 0.9253 | likely_pathogenic | 0.901 | pathogenic | -0.879 | Destabilizing | 0.993 | D | 0.882 | deleterious | D | 0.548151714 | None | None | N |
P/M | 0.9856 | likely_pathogenic | 0.9815 | pathogenic | -0.807 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
P/N | 0.9947 | likely_pathogenic | 0.9931 | pathogenic | -1.858 | Destabilizing | 0.995 | D | 0.895 | deleterious | None | None | None | None | N |
P/Q | 0.9851 | likely_pathogenic | 0.9777 | pathogenic | -1.909 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
P/R | 0.9858 | likely_pathogenic | 0.9794 | pathogenic | -1.353 | Destabilizing | 0.993 | D | 0.885 | deleterious | D | 0.526795456 | None | None | N |
P/S | 0.9466 | likely_pathogenic | 0.9354 | pathogenic | -2.41 | Highly Destabilizing | 0.568 | D | 0.553 | neutral | N | 0.507183491 | None | None | N |
P/T | 0.9212 | likely_pathogenic | 0.9038 | pathogenic | -2.184 | Highly Destabilizing | 0.987 | D | 0.797 | deleterious | D | 0.540607297 | None | None | N |
P/V | 0.9609 | likely_pathogenic | 0.951 | pathogenic | -1.239 | Destabilizing | 0.995 | D | 0.88 | deleterious | None | None | None | None | N |
P/W | 0.9989 | likely_pathogenic | 0.9984 | pathogenic | -1.879 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
P/Y | 0.9983 | likely_pathogenic | 0.9973 | pathogenic | -1.557 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.