Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2857585948;85949;85950 chr2:178560409;178560408;178560407chr2:179425136;179425135;179425134
N2AB2693481025;81026;81027 chr2:178560409;178560408;178560407chr2:179425136;179425135;179425134
N2A2600778244;78245;78246 chr2:178560409;178560408;178560407chr2:179425136;179425135;179425134
N2B1951058753;58754;58755 chr2:178560409;178560408;178560407chr2:179425136;179425135;179425134
Novex-11963559128;59129;59130 chr2:178560409;178560408;178560407chr2:179425136;179425135;179425134
Novex-21970259329;59330;59331 chr2:178560409;178560408;178560407chr2:179425136;179425135;179425134
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAG
  • RefSeq wild type template codon: CTC
  • Domain: Fn3-96
  • Domain position: 26
  • Structural Position: 28
  • Q(SASA): 0.867
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/D rs752650483 0.003 0.007 N 0.194 0.035 0.222439326576 gnomAD-2.1.1 7.15E-06 None None None None I None 4.13E-05 0 None 9.68E-05 0 None 0 None 0 0 0
E/D rs752650483 0.003 0.007 N 0.194 0.035 0.222439326576 gnomAD-4.0.0 1.59153E-06 None None None None I None 0 0 None 4.7669E-05 0 None 0 0 0 0 0
E/G rs1703193280 None 0.684 N 0.465 0.162 0.330331372229 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
E/G rs1703193280 None 0.684 N 0.465 0.162 0.330331372229 gnomAD-4.0.0 6.57376E-06 None None None None I None 0 0 None 0 0 None 0 0 1.47024E-05 0 0
E/K rs760762822 0.773 0.037 N 0.193 0.132 0.232513804876 gnomAD-2.1.1 3.93E-05 None None None None I None 4.13E-05 0 None 0 0 None 0 None 0 7.83E-05 0
E/K rs760762822 0.773 0.037 N 0.193 0.132 0.232513804876 gnomAD-3.1.2 3.94E-05 None None None None I None 4.83E-05 0 0 0 0 None 0 0 5.88E-05 0 0
E/K rs760762822 0.773 0.037 N 0.193 0.132 0.232513804876 gnomAD-4.0.0 5.70177E-05 None None None None I None 2.67073E-05 0 None 0 2.23105E-05 None 1.56353E-05 0 7.28943E-05 0 3.20256E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.0857 likely_benign 0.0846 benign -0.125 Destabilizing 0.309 N 0.366 neutral N 0.448485573 None None I
E/C 0.6138 likely_pathogenic 0.5934 pathogenic 0.195 Stabilizing 0.996 D 0.291 neutral None None None None I
E/D 0.0907 likely_benign 0.0902 benign -0.177 Destabilizing 0.007 N 0.194 neutral N 0.465340537 None None I
E/F 0.4827 ambiguous 0.4758 ambiguous -0.196 Destabilizing 0.953 D 0.359 neutral None None None None I
E/G 0.1046 likely_benign 0.1042 benign -0.266 Destabilizing 0.684 D 0.465 neutral N 0.485505166 None None I
E/H 0.263 likely_benign 0.2512 benign 0.095 Stabilizing 0.953 D 0.332 neutral None None None None I
E/I 0.1649 likely_benign 0.1666 benign 0.192 Stabilizing 0.037 N 0.311 neutral None None None None I
E/K 0.0842 likely_benign 0.0838 benign 0.637 Stabilizing 0.037 N 0.193 neutral N 0.495738015 None None I
E/L 0.183 likely_benign 0.1816 benign 0.192 Stabilizing 0.373 N 0.384 neutral None None None None I
E/M 0.2615 likely_benign 0.262 benign 0.245 Stabilizing 0.953 D 0.333 neutral None None None None I
E/N 0.154 likely_benign 0.1529 benign 0.403 Stabilizing 0.59 D 0.344 neutral None None None None I
E/P 0.3001 likely_benign 0.299 benign 0.106 Stabilizing 0.953 D 0.373 neutral None None None None I
E/Q 0.0972 likely_benign 0.0961 benign 0.415 Stabilizing 0.846 D 0.36 neutral N 0.503032134 None None I
E/R 0.1427 likely_benign 0.1394 benign 0.703 Stabilizing 0.59 D 0.348 neutral None None None None I
E/S 0.1171 likely_benign 0.1172 benign 0.272 Stabilizing 0.742 D 0.34 neutral None None None None I
E/T 0.1283 likely_benign 0.1289 benign 0.393 Stabilizing 0.742 D 0.449 neutral None None None None I
E/V 0.104 likely_benign 0.1046 benign 0.106 Stabilizing 0.012 N 0.188 neutral N 0.469978353 None None I
E/W 0.7214 likely_pathogenic 0.6882 pathogenic -0.132 Destabilizing 0.996 D 0.348 neutral None None None None I
E/Y 0.3661 ambiguous 0.3562 ambiguous 0.038 Stabilizing 0.984 D 0.372 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.