Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28575 | 85948;85949;85950 | chr2:178560409;178560408;178560407 | chr2:179425136;179425135;179425134 |
N2AB | 26934 | 81025;81026;81027 | chr2:178560409;178560408;178560407 | chr2:179425136;179425135;179425134 |
N2A | 26007 | 78244;78245;78246 | chr2:178560409;178560408;178560407 | chr2:179425136;179425135;179425134 |
N2B | 19510 | 58753;58754;58755 | chr2:178560409;178560408;178560407 | chr2:179425136;179425135;179425134 |
Novex-1 | 19635 | 59128;59129;59130 | chr2:178560409;178560408;178560407 | chr2:179425136;179425135;179425134 |
Novex-2 | 19702 | 59329;59330;59331 | chr2:178560409;178560408;178560407 | chr2:179425136;179425135;179425134 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs752650483 | 0.003 | 0.007 | N | 0.194 | 0.035 | 0.222439326576 | gnomAD-2.1.1 | 7.15E-06 | None | None | None | None | I | None | 4.13E-05 | 0 | None | 9.68E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs752650483 | 0.003 | 0.007 | N | 0.194 | 0.035 | 0.222439326576 | gnomAD-4.0.0 | 1.59153E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.7669E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1703193280 | None | 0.684 | N | 0.465 | 0.162 | 0.330331372229 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1703193280 | None | 0.684 | N | 0.465 | 0.162 | 0.330331372229 | gnomAD-4.0.0 | 6.57376E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47024E-05 | 0 | 0 |
E/K | rs760762822 | 0.773 | 0.037 | N | 0.193 | 0.132 | 0.232513804876 | gnomAD-2.1.1 | 3.93E-05 | None | None | None | None | I | None | 4.13E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.83E-05 | 0 |
E/K | rs760762822 | 0.773 | 0.037 | N | 0.193 | 0.132 | 0.232513804876 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
E/K | rs760762822 | 0.773 | 0.037 | N | 0.193 | 0.132 | 0.232513804876 | gnomAD-4.0.0 | 5.70177E-05 | None | None | None | None | I | None | 2.67073E-05 | 0 | None | 0 | 2.23105E-05 | None | 1.56353E-05 | 0 | 7.28943E-05 | 0 | 3.20256E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0857 | likely_benign | 0.0846 | benign | -0.125 | Destabilizing | 0.309 | N | 0.366 | neutral | N | 0.448485573 | None | None | I |
E/C | 0.6138 | likely_pathogenic | 0.5934 | pathogenic | 0.195 | Stabilizing | 0.996 | D | 0.291 | neutral | None | None | None | None | I |
E/D | 0.0907 | likely_benign | 0.0902 | benign | -0.177 | Destabilizing | 0.007 | N | 0.194 | neutral | N | 0.465340537 | None | None | I |
E/F | 0.4827 | ambiguous | 0.4758 | ambiguous | -0.196 | Destabilizing | 0.953 | D | 0.359 | neutral | None | None | None | None | I |
E/G | 0.1046 | likely_benign | 0.1042 | benign | -0.266 | Destabilizing | 0.684 | D | 0.465 | neutral | N | 0.485505166 | None | None | I |
E/H | 0.263 | likely_benign | 0.2512 | benign | 0.095 | Stabilizing | 0.953 | D | 0.332 | neutral | None | None | None | None | I |
E/I | 0.1649 | likely_benign | 0.1666 | benign | 0.192 | Stabilizing | 0.037 | N | 0.311 | neutral | None | None | None | None | I |
E/K | 0.0842 | likely_benign | 0.0838 | benign | 0.637 | Stabilizing | 0.037 | N | 0.193 | neutral | N | 0.495738015 | None | None | I |
E/L | 0.183 | likely_benign | 0.1816 | benign | 0.192 | Stabilizing | 0.373 | N | 0.384 | neutral | None | None | None | None | I |
E/M | 0.2615 | likely_benign | 0.262 | benign | 0.245 | Stabilizing | 0.953 | D | 0.333 | neutral | None | None | None | None | I |
E/N | 0.154 | likely_benign | 0.1529 | benign | 0.403 | Stabilizing | 0.59 | D | 0.344 | neutral | None | None | None | None | I |
E/P | 0.3001 | likely_benign | 0.299 | benign | 0.106 | Stabilizing | 0.953 | D | 0.373 | neutral | None | None | None | None | I |
E/Q | 0.0972 | likely_benign | 0.0961 | benign | 0.415 | Stabilizing | 0.846 | D | 0.36 | neutral | N | 0.503032134 | None | None | I |
E/R | 0.1427 | likely_benign | 0.1394 | benign | 0.703 | Stabilizing | 0.59 | D | 0.348 | neutral | None | None | None | None | I |
E/S | 0.1171 | likely_benign | 0.1172 | benign | 0.272 | Stabilizing | 0.742 | D | 0.34 | neutral | None | None | None | None | I |
E/T | 0.1283 | likely_benign | 0.1289 | benign | 0.393 | Stabilizing | 0.742 | D | 0.449 | neutral | None | None | None | None | I |
E/V | 0.104 | likely_benign | 0.1046 | benign | 0.106 | Stabilizing | 0.012 | N | 0.188 | neutral | N | 0.469978353 | None | None | I |
E/W | 0.7214 | likely_pathogenic | 0.6882 | pathogenic | -0.132 | Destabilizing | 0.996 | D | 0.348 | neutral | None | None | None | None | I |
E/Y | 0.3661 | ambiguous | 0.3562 | ambiguous | 0.038 | Stabilizing | 0.984 | D | 0.372 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.