Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28576 | 85951;85952;85953 | chr2:178560406;178560405;178560404 | chr2:179425133;179425132;179425131 |
N2AB | 26935 | 81028;81029;81030 | chr2:178560406;178560405;178560404 | chr2:179425133;179425132;179425131 |
N2A | 26008 | 78247;78248;78249 | chr2:178560406;178560405;178560404 | chr2:179425133;179425132;179425131 |
N2B | 19511 | 58756;58757;58758 | chr2:178560406;178560405;178560404 | chr2:179425133;179425132;179425131 |
Novex-1 | 19636 | 59131;59132;59133 | chr2:178560406;178560405;178560404 | chr2:179425133;179425132;179425131 |
Novex-2 | 19703 | 59332;59333;59334 | chr2:178560406;178560405;178560404 | chr2:179425133;179425132;179425131 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1313703882 | None | 0.497 | N | 0.528 | 0.112 | 0.218112801441 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1121 | likely_benign | 0.1032 | benign | -0.54 | Destabilizing | 0.072 | N | 0.502 | neutral | None | None | None | None | I |
S/C | 0.1326 | likely_benign | 0.1223 | benign | -0.278 | Destabilizing | 0.883 | D | 0.553 | neutral | N | 0.472592871 | None | None | I |
S/D | 0.2188 | likely_benign | 0.2045 | benign | -0.15 | Destabilizing | 0.157 | N | 0.46 | neutral | None | None | None | None | I |
S/E | 0.3652 | ambiguous | 0.324 | benign | -0.245 | Destabilizing | 0.272 | N | 0.469 | neutral | None | None | None | None | I |
S/F | 0.1979 | likely_benign | 0.1781 | benign | -1.177 | Destabilizing | 0.726 | D | 0.684 | prob.neutral | None | None | None | None | I |
S/G | 0.1065 | likely_benign | 0.1004 | benign | -0.648 | Destabilizing | 0.124 | N | 0.464 | neutral | N | 0.467971289 | None | None | I |
S/H | 0.2513 | likely_benign | 0.2325 | benign | -1.257 | Destabilizing | 0.832 | D | 0.526 | neutral | None | None | None | None | I |
S/I | 0.1938 | likely_benign | 0.1726 | benign | -0.379 | Destabilizing | 0.331 | N | 0.68 | prob.neutral | N | 0.469692809 | None | None | I |
S/K | 0.4743 | ambiguous | 0.4265 | ambiguous | -0.558 | Destabilizing | 0.157 | N | 0.471 | neutral | None | None | None | None | I |
S/L | 0.1298 | likely_benign | 0.1138 | benign | -0.379 | Destabilizing | 0.157 | N | 0.591 | neutral | None | None | None | None | I |
S/M | 0.1757 | likely_benign | 0.1609 | benign | 0.091 | Stabilizing | 0.909 | D | 0.527 | neutral | None | None | None | None | I |
S/N | 0.0895 | likely_benign | 0.087 | benign | -0.301 | Destabilizing | 0.001 | N | 0.261 | neutral | N | 0.463969526 | None | None | I |
S/P | 0.8138 | likely_pathogenic | 0.7678 | pathogenic | -0.405 | Destabilizing | 0.726 | D | 0.529 | neutral | None | None | None | None | I |
S/Q | 0.4059 | ambiguous | 0.3642 | ambiguous | -0.615 | Destabilizing | 0.567 | D | 0.47 | neutral | None | None | None | None | I |
S/R | 0.4645 | ambiguous | 0.4195 | ambiguous | -0.329 | Destabilizing | 0.497 | N | 0.528 | neutral | N | 0.519073448 | None | None | I |
S/T | 0.0793 | likely_benign | 0.0785 | benign | -0.395 | Destabilizing | 0.001 | N | 0.211 | neutral | N | 0.488731898 | None | None | I |
S/V | 0.2034 | likely_benign | 0.1791 | benign | -0.405 | Destabilizing | 0.396 | N | 0.596 | neutral | None | None | None | None | I |
S/W | 0.3383 | likely_benign | 0.3001 | benign | -1.152 | Destabilizing | 0.968 | D | 0.721 | prob.delet. | None | None | None | None | I |
S/Y | 0.1566 | likely_benign | 0.1438 | benign | -0.885 | Destabilizing | 0.726 | D | 0.669 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.