Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28592 | 85999;86000;86001 | chr2:178560358;178560357;178560356 | chr2:179425085;179425084;179425083 |
N2AB | 26951 | 81076;81077;81078 | chr2:178560358;178560357;178560356 | chr2:179425085;179425084;179425083 |
N2A | 26024 | 78295;78296;78297 | chr2:178560358;178560357;178560356 | chr2:179425085;179425084;179425083 |
N2B | 19527 | 58804;58805;58806 | chr2:178560358;178560357;178560356 | chr2:179425085;179425084;179425083 |
Novex-1 | 19652 | 59179;59180;59181 | chr2:178560358;178560357;178560356 | chr2:179425085;179425084;179425083 |
Novex-2 | 19719 | 59380;59381;59382 | chr2:178560358;178560357;178560356 | chr2:179425085;179425084;179425083 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.014 | N | 0.261 | 0.098 | 0.201204373187 | gnomAD-4.0.0 | 4.77445E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.29898E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6658 | likely_pathogenic | 0.5992 | pathogenic | -0.206 | Destabilizing | 0.86 | D | 0.541 | neutral | None | None | None | None | N |
K/C | 0.895 | likely_pathogenic | 0.8473 | pathogenic | -0.324 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/D | 0.9125 | likely_pathogenic | 0.8807 | pathogenic | 0.153 | Stabilizing | 0.915 | D | 0.549 | neutral | None | None | None | None | N |
K/E | 0.4774 | ambiguous | 0.4079 | ambiguous | 0.191 | Stabilizing | 0.822 | D | 0.553 | neutral | N | 0.514574492 | None | None | N |
K/F | 0.9535 | likely_pathogenic | 0.9306 | pathogenic | -0.218 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/G | 0.7147 | likely_pathogenic | 0.6732 | pathogenic | -0.471 | Destabilizing | 0.754 | D | 0.62 | neutral | None | None | None | None | N |
K/H | 0.6515 | likely_pathogenic | 0.5793 | pathogenic | -0.776 | Destabilizing | 0.978 | D | 0.581 | neutral | None | None | None | None | N |
K/I | 0.7153 | likely_pathogenic | 0.6257 | pathogenic | 0.432 | Stabilizing | 0.971 | D | 0.716 | prob.delet. | N | 0.47321889 | None | None | N |
K/L | 0.6889 | likely_pathogenic | 0.6119 | pathogenic | 0.432 | Stabilizing | 0.956 | D | 0.615 | neutral | None | None | None | None | N |
K/M | 0.4972 | ambiguous | 0.4236 | ambiguous | 0.265 | Stabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | N |
K/N | 0.7898 | likely_pathogenic | 0.7245 | pathogenic | 0.075 | Stabilizing | 0.032 | N | 0.261 | neutral | N | 0.478093962 | None | None | N |
K/P | 0.9205 | likely_pathogenic | 0.9008 | pathogenic | 0.249 | Stabilizing | 0.993 | D | 0.59 | neutral | None | None | None | None | N |
K/Q | 0.2936 | likely_benign | 0.247 | benign | -0.1 | Destabilizing | 0.942 | D | 0.567 | neutral | N | 0.508666931 | None | None | N |
K/R | 0.1115 | likely_benign | 0.1001 | benign | -0.195 | Destabilizing | 0.014 | N | 0.261 | neutral | N | 0.488660114 | None | None | N |
K/S | 0.7813 | likely_pathogenic | 0.7184 | pathogenic | -0.526 | Destabilizing | 0.754 | D | 0.529 | neutral | None | None | None | None | N |
K/T | 0.5373 | ambiguous | 0.4552 | ambiguous | -0.314 | Destabilizing | 0.822 | D | 0.556 | neutral | N | 0.466671523 | None | None | N |
K/V | 0.6753 | likely_pathogenic | 0.5921 | pathogenic | 0.249 | Stabilizing | 0.978 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/W | 0.9279 | likely_pathogenic | 0.8986 | pathogenic | -0.136 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | N |
K/Y | 0.8836 | likely_pathogenic | 0.843 | pathogenic | 0.185 | Stabilizing | 0.993 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.