Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28594 | 86005;86006;86007 | chr2:178560352;178560351;178560350 | chr2:179425079;179425078;179425077 |
N2AB | 26953 | 81082;81083;81084 | chr2:178560352;178560351;178560350 | chr2:179425079;179425078;179425077 |
N2A | 26026 | 78301;78302;78303 | chr2:178560352;178560351;178560350 | chr2:179425079;179425078;179425077 |
N2B | 19529 | 58810;58811;58812 | chr2:178560352;178560351;178560350 | chr2:179425079;179425078;179425077 |
Novex-1 | 19654 | 59185;59186;59187 | chr2:178560352;178560351;178560350 | chr2:179425079;179425078;179425077 |
Novex-2 | 19721 | 59386;59387;59388 | chr2:178560352;178560351;178560350 | chr2:179425079;179425078;179425077 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs1703174198 | None | 0.117 | N | 0.34 | 0.134 | 0.126345400529 | gnomAD-4.0.0 | 1.59153E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77608E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.141 | likely_benign | 0.1293 | benign | -0.386 | Destabilizing | 0.035 | N | 0.284 | neutral | None | None | None | None | N |
S/C | 0.1449 | likely_benign | 0.1125 | benign | -0.349 | Destabilizing | 0.915 | D | 0.315 | neutral | N | 0.516063672 | None | None | N |
S/D | 0.8213 | likely_pathogenic | 0.7761 | pathogenic | 0.114 | Stabilizing | 0.149 | N | 0.304 | neutral | None | None | None | None | N |
S/E | 0.9153 | likely_pathogenic | 0.8868 | pathogenic | 0.021 | Stabilizing | 0.262 | N | 0.338 | neutral | None | None | None | None | N |
S/F | 0.5831 | likely_pathogenic | 0.5357 | ambiguous | -0.909 | Destabilizing | 0.235 | N | 0.364 | neutral | None | None | None | None | N |
S/G | 0.0667 | likely_benign | 0.0587 | benign | -0.504 | Destabilizing | None | N | 0.13 | neutral | N | 0.4100819 | None | None | N |
S/H | 0.6409 | likely_pathogenic | 0.5918 | pathogenic | -0.973 | Destabilizing | 0.935 | D | 0.297 | neutral | None | None | None | None | N |
S/I | 0.4166 | ambiguous | 0.3301 | benign | -0.204 | Destabilizing | 0.484 | N | 0.368 | neutral | N | 0.497705927 | None | None | N |
S/K | 0.95 | likely_pathogenic | 0.9333 | pathogenic | -0.552 | Destabilizing | 0.149 | N | 0.331 | neutral | None | None | None | None | N |
S/L | 0.2355 | likely_benign | 0.1992 | benign | -0.204 | Destabilizing | 0.149 | N | 0.332 | neutral | None | None | None | None | N |
S/M | 0.3767 | ambiguous | 0.3248 | benign | 0.012 | Stabilizing | 0.935 | D | 0.296 | neutral | None | None | None | None | N |
S/N | 0.2977 | likely_benign | 0.2513 | benign | -0.257 | Destabilizing | 0.117 | N | 0.345 | neutral | N | 0.513633129 | None | None | N |
S/P | 0.8782 | likely_pathogenic | 0.8401 | pathogenic | -0.236 | Destabilizing | 0.555 | D | 0.305 | neutral | None | None | None | None | N |
S/Q | 0.8088 | likely_pathogenic | 0.7713 | pathogenic | -0.525 | Destabilizing | 0.555 | D | 0.319 | neutral | None | None | None | None | N |
S/R | 0.9096 | likely_pathogenic | 0.8859 | pathogenic | -0.315 | Destabilizing | 0.484 | N | 0.31 | neutral | N | 0.516942793 | None | None | N |
S/T | 0.1437 | likely_benign | 0.1286 | benign | -0.382 | Destabilizing | 0.117 | N | 0.34 | neutral | N | 0.48142471 | None | None | N |
S/V | 0.4115 | ambiguous | 0.3316 | benign | -0.236 | Destabilizing | 0.262 | N | 0.367 | neutral | None | None | None | None | N |
S/W | 0.7286 | likely_pathogenic | 0.6909 | pathogenic | -0.896 | Destabilizing | 0.001 | N | 0.362 | neutral | None | None | None | None | N |
S/Y | 0.4928 | ambiguous | 0.4542 | ambiguous | -0.632 | Destabilizing | 0.235 | N | 0.365 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.