Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28596 | 86011;86012;86013 | chr2:178560346;178560345;178560344 | chr2:179425073;179425072;179425071 |
N2AB | 26955 | 81088;81089;81090 | chr2:178560346;178560345;178560344 | chr2:179425073;179425072;179425071 |
N2A | 26028 | 78307;78308;78309 | chr2:178560346;178560345;178560344 | chr2:179425073;179425072;179425071 |
N2B | 19531 | 58816;58817;58818 | chr2:178560346;178560345;178560344 | chr2:179425073;179425072;179425071 |
Novex-1 | 19656 | 59191;59192;59193 | chr2:178560346;178560345;178560344 | chr2:179425073;179425072;179425071 |
Novex-2 | 19723 | 59392;59393;59394 | chr2:178560346;178560345;178560344 | chr2:179425073;179425072;179425071 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.603 | N | 0.493 | 0.235 | 0.177238962908 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7458 | likely_pathogenic | 0.6835 | pathogenic | 0.055 | Stabilizing | 0.707 | D | 0.467 | neutral | None | None | None | None | I |
R/C | 0.2458 | likely_benign | 0.2014 | benign | -0.31 | Destabilizing | 0.995 | D | 0.596 | neutral | None | None | None | None | I |
R/D | 0.9169 | likely_pathogenic | 0.8859 | pathogenic | -0.272 | Destabilizing | 0.981 | D | 0.516 | neutral | None | None | None | None | I |
R/E | 0.7738 | likely_pathogenic | 0.7076 | pathogenic | -0.223 | Destabilizing | 0.83 | D | 0.433 | neutral | None | None | None | None | I |
R/F | 0.7013 | likely_pathogenic | 0.6699 | pathogenic | -0.264 | Destabilizing | 0.809 | D | 0.582 | neutral | None | None | None | None | I |
R/G | 0.5574 | ambiguous | 0.4847 | ambiguous | -0.093 | Destabilizing | 0.928 | D | 0.42 | neutral | N | 0.516958649 | None | None | I |
R/H | 0.1339 | likely_benign | 0.1253 | benign | -0.58 | Destabilizing | 0.995 | D | 0.463 | neutral | None | None | None | None | I |
R/I | 0.5436 | ambiguous | 0.4915 | ambiguous | 0.397 | Stabilizing | 0.761 | D | 0.527 | neutral | N | 0.486283489 | None | None | I |
R/K | 0.2194 | likely_benign | 0.2046 | benign | -0.172 | Destabilizing | 0.603 | D | 0.493 | neutral | N | 0.517478724 | None | None | I |
R/L | 0.4189 | ambiguous | 0.3698 | ambiguous | 0.397 | Stabilizing | 0.007 | N | 0.44 | neutral | None | None | None | None | I |
R/M | 0.5688 | likely_pathogenic | 0.5228 | ambiguous | -0.098 | Destabilizing | 0.894 | D | 0.464 | neutral | None | None | None | None | I |
R/N | 0.8082 | likely_pathogenic | 0.7685 | pathogenic | -0.148 | Destabilizing | 0.981 | D | 0.465 | neutral | None | None | None | None | I |
R/P | 0.8788 | likely_pathogenic | 0.8465 | pathogenic | 0.301 | Stabilizing | 0.981 | D | 0.499 | neutral | None | None | None | None | I |
R/Q | 0.1891 | likely_benign | 0.1591 | benign | -0.159 | Destabilizing | 0.981 | D | 0.469 | neutral | None | None | None | None | I |
R/S | 0.7882 | likely_pathogenic | 0.7408 | pathogenic | -0.328 | Destabilizing | 0.928 | D | 0.419 | neutral | N | 0.519228163 | None | None | I |
R/T | 0.6417 | likely_pathogenic | 0.5789 | pathogenic | -0.167 | Destabilizing | 0.645 | D | 0.423 | neutral | N | 0.513323698 | None | None | I |
R/V | 0.6454 | likely_pathogenic | 0.5811 | pathogenic | 0.301 | Stabilizing | 0.547 | D | 0.495 | neutral | None | None | None | None | I |
R/W | 0.2369 | likely_benign | 0.2083 | benign | -0.451 | Destabilizing | 0.995 | D | 0.641 | neutral | None | None | None | None | I |
R/Y | 0.4653 | ambiguous | 0.4281 | ambiguous | -0.034 | Destabilizing | 0.945 | D | 0.517 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.