Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28620 | 86083;86084;86085 | chr2:178560274;178560273;178560272 | chr2:179425001;179425000;179424999 |
N2AB | 26979 | 81160;81161;81162 | chr2:178560274;178560273;178560272 | chr2:179425001;179425000;179424999 |
N2A | 26052 | 78379;78380;78381 | chr2:178560274;178560273;178560272 | chr2:179425001;179425000;179424999 |
N2B | 19555 | 58888;58889;58890 | chr2:178560274;178560273;178560272 | chr2:179425001;179425000;179424999 |
Novex-1 | 19680 | 59263;59264;59265 | chr2:178560274;178560273;178560272 | chr2:179425001;179425000;179424999 |
Novex-2 | 19747 | 59464;59465;59466 | chr2:178560274;178560273;178560272 | chr2:179425001;179425000;179424999 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.991 | N | 0.621 | 0.328 | 0.297718772494 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8582E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2059 | likely_benign | 0.1762 | benign | -0.989 | Destabilizing | 0.939 | D | 0.617 | neutral | N | 0.483107165 | None | None | N |
E/C | 0.8215 | likely_pathogenic | 0.7926 | pathogenic | -0.569 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
E/D | 0.1588 | likely_benign | 0.1561 | benign | -1.308 | Destabilizing | 0.02 | N | 0.154 | neutral | D | 0.52269533 | None | None | N |
E/F | 0.7129 | likely_pathogenic | 0.6787 | pathogenic | -0.263 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
E/G | 0.3392 | likely_benign | 0.2713 | benign | -1.409 | Destabilizing | 0.939 | D | 0.676 | prob.neutral | N | 0.496046859 | None | None | N |
E/H | 0.6082 | likely_pathogenic | 0.5502 | ambiguous | -0.541 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/I | 0.319 | likely_benign | 0.2959 | benign | 0.184 | Stabilizing | 0.993 | D | 0.823 | deleterious | None | None | None | None | N |
E/K | 0.3544 | ambiguous | 0.2828 | benign | -0.919 | Destabilizing | 0.939 | D | 0.486 | neutral | N | 0.465937508 | None | None | N |
E/L | 0.3656 | ambiguous | 0.3264 | benign | 0.184 | Stabilizing | 0.993 | D | 0.814 | deleterious | None | None | None | None | N |
E/M | 0.42 | ambiguous | 0.3851 | ambiguous | 0.744 | Stabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
E/N | 0.3369 | likely_benign | 0.3039 | benign | -1.435 | Destabilizing | 0.973 | D | 0.656 | neutral | None | None | None | None | N |
E/P | 0.7828 | likely_pathogenic | 0.7012 | pathogenic | -0.186 | Destabilizing | 0.993 | D | 0.825 | deleterious | None | None | None | None | N |
E/Q | 0.2042 | likely_benign | 0.1711 | benign | -1.248 | Destabilizing | 0.991 | D | 0.621 | neutral | N | 0.515614642 | None | None | N |
E/R | 0.515 | ambiguous | 0.4367 | ambiguous | -0.602 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/S | 0.2369 | likely_benign | 0.2036 | benign | -1.853 | Destabilizing | 0.953 | D | 0.503 | neutral | None | None | None | None | N |
E/T | 0.2626 | likely_benign | 0.2302 | benign | -1.494 | Destabilizing | 0.993 | D | 0.771 | deleterious | None | None | None | None | N |
E/V | 0.2148 | likely_benign | 0.1964 | benign | -0.186 | Destabilizing | 0.991 | D | 0.797 | deleterious | N | 0.476879421 | None | None | N |
E/W | 0.8943 | likely_pathogenic | 0.8759 | pathogenic | -0.008 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
E/Y | 0.6205 | likely_pathogenic | 0.5797 | pathogenic | -0.001 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.