Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28621 | 86086;86087;86088 | chr2:178560271;178560270;178560269 | chr2:179424998;179424997;179424996 |
N2AB | 26980 | 81163;81164;81165 | chr2:178560271;178560270;178560269 | chr2:179424998;179424997;179424996 |
N2A | 26053 | 78382;78383;78384 | chr2:178560271;178560270;178560269 | chr2:179424998;179424997;179424996 |
N2B | 19556 | 58891;58892;58893 | chr2:178560271;178560270;178560269 | chr2:179424998;179424997;179424996 |
Novex-1 | 19681 | 59266;59267;59268 | chr2:178560271;178560270;178560269 | chr2:179424998;179424997;179424996 |
Novex-2 | 19748 | 59467;59468;59469 | chr2:178560271;178560270;178560269 | chr2:179424998;179424997;179424996 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs751308383 | -2.82 | 1.0 | D | 0.845 | 0.848 | 0.853231469175 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.66E-05 | 0 |
Y/H | rs751308383 | -2.82 | 1.0 | D | 0.845 | 0.848 | 0.853231469175 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/H | rs751308383 | -2.82 | 1.0 | D | 0.845 | 0.848 | 0.853231469175 | gnomAD-4.0.0 | 1.36331E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.86472E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9891 | likely_pathogenic | 0.9802 | pathogenic | -3.459 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Y/C | 0.9172 | likely_pathogenic | 0.8555 | pathogenic | -1.925 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.669453425 | None | None | N |
Y/D | 0.9867 | likely_pathogenic | 0.9793 | pathogenic | -3.648 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.694759372 | None | None | N |
Y/E | 0.9956 | likely_pathogenic | 0.9926 | pathogenic | -3.484 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/F | 0.33 | likely_benign | 0.3114 | benign | -1.441 | Destabilizing | 0.999 | D | 0.763 | deleterious | D | 0.617257457 | None | None | N |
Y/G | 0.9735 | likely_pathogenic | 0.9581 | pathogenic | -3.821 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Y/H | 0.9712 | likely_pathogenic | 0.9519 | pathogenic | -2.226 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.694759372 | None | None | N |
Y/I | 0.9367 | likely_pathogenic | 0.8994 | pathogenic | -2.243 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/K | 0.9971 | likely_pathogenic | 0.9956 | pathogenic | -2.445 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/L | 0.9097 | likely_pathogenic | 0.873 | pathogenic | -2.243 | Highly Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
Y/M | 0.9531 | likely_pathogenic | 0.9303 | pathogenic | -1.798 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Y/N | 0.9347 | likely_pathogenic | 0.8973 | pathogenic | -3.094 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.694557568 | None | None | N |
Y/P | 0.999 | likely_pathogenic | 0.9984 | pathogenic | -2.663 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
Y/Q | 0.9959 | likely_pathogenic | 0.9927 | pathogenic | -2.96 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Y/R | 0.9931 | likely_pathogenic | 0.9894 | pathogenic | -1.945 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Y/S | 0.9745 | likely_pathogenic | 0.9587 | pathogenic | -3.428 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.694759372 | None | None | N |
Y/T | 0.9844 | likely_pathogenic | 0.9716 | pathogenic | -3.169 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
Y/V | 0.8738 | likely_pathogenic | 0.8175 | pathogenic | -2.663 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
Y/W | 0.8598 | likely_pathogenic | 0.8333 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.