Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2867 | 8824;8825;8826 | chr2:178770102;178770101;178770100 | chr2:179634829;179634828;179634827 |
N2AB | 2867 | 8824;8825;8826 | chr2:178770102;178770101;178770100 | chr2:179634829;179634828;179634827 |
N2A | 2867 | 8824;8825;8826 | chr2:178770102;178770101;178770100 | chr2:179634829;179634828;179634827 |
N2B | 2821 | 8686;8687;8688 | chr2:178770102;178770101;178770100 | chr2:179634829;179634828;179634827 |
Novex-1 | 2821 | 8686;8687;8688 | chr2:178770102;178770101;178770100 | chr2:179634829;179634828;179634827 |
Novex-2 | 2821 | 8686;8687;8688 | chr2:178770102;178770101;178770100 | chr2:179634829;179634828;179634827 |
Novex-3 | 2867 | 8824;8825;8826 | chr2:178770102;178770101;178770100 | chr2:179634829;179634828;179634827 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.02 | D | 0.434 | 0.19 | 0.441118900842 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1594 | likely_benign | 0.2102 | benign | -1.787 | Destabilizing | 0.055 | N | 0.585 | neutral | D | 0.542040284 | None | None | N |
V/C | 0.6383 | likely_pathogenic | 0.7392 | pathogenic | -1.274 | Destabilizing | 0.968 | D | 0.649 | neutral | None | None | None | None | N |
V/D | 0.5164 | ambiguous | 0.6313 | pathogenic | -1.889 | Destabilizing | 0.726 | D | 0.777 | deleterious | None | None | None | None | N |
V/E | 0.2467 | likely_benign | 0.3218 | benign | -1.767 | Destabilizing | 0.667 | D | 0.754 | deleterious | N | 0.50931781 | None | None | N |
V/F | 0.1484 | likely_benign | 0.1911 | benign | -1.136 | Destabilizing | 0.003 | N | 0.425 | neutral | None | None | None | None | N |
V/G | 0.3145 | likely_benign | 0.4488 | ambiguous | -2.241 | Highly Destabilizing | 0.497 | N | 0.751 | deleterious | D | 0.665640837 | None | None | N |
V/H | 0.4182 | ambiguous | 0.5235 | ambiguous | -1.919 | Destabilizing | 0.968 | D | 0.759 | deleterious | None | None | None | None | N |
V/I | 0.0744 | likely_benign | 0.0754 | benign | -0.578 | Destabilizing | 0.072 | N | 0.551 | neutral | None | None | None | None | N |
V/K | 0.1853 | likely_benign | 0.2763 | benign | -1.433 | Destabilizing | 0.567 | D | 0.745 | deleterious | None | None | None | None | N |
V/L | 0.1149 | likely_benign | 0.1475 | benign | -0.578 | Destabilizing | 0.001 | N | 0.354 | neutral | N | 0.507439841 | None | None | N |
V/M | 0.0707 | likely_benign | 0.0831 | benign | -0.525 | Destabilizing | 0.02 | N | 0.434 | neutral | D | 0.62750759 | None | None | N |
V/N | 0.303 | likely_benign | 0.3868 | ambiguous | -1.459 | Destabilizing | 0.726 | D | 0.78 | deleterious | None | None | None | None | N |
V/P | 0.9691 | likely_pathogenic | 0.9833 | pathogenic | -0.949 | Destabilizing | 0.89 | D | 0.752 | deleterious | None | None | None | None | N |
V/Q | 0.1844 | likely_benign | 0.2545 | benign | -1.448 | Destabilizing | 0.567 | D | 0.754 | deleterious | None | None | None | None | N |
V/R | 0.1723 | likely_benign | 0.2664 | benign | -1.135 | Destabilizing | 0.567 | D | 0.778 | deleterious | None | None | None | None | N |
V/S | 0.2068 | likely_benign | 0.278 | benign | -2.086 | Highly Destabilizing | 0.567 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/T | 0.1392 | likely_benign | 0.175 | benign | -1.835 | Destabilizing | 0.272 | N | 0.564 | neutral | None | None | None | None | N |
V/W | 0.6665 | likely_pathogenic | 0.7834 | pathogenic | -1.531 | Destabilizing | 0.968 | D | 0.764 | deleterious | None | None | None | None | N |
V/Y | 0.4864 | ambiguous | 0.5863 | pathogenic | -1.17 | Destabilizing | 0.396 | N | 0.675 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.