Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28677 | 86254;86255;86256 | chr2:178560103;178560102;178560101 | chr2:179424830;179424829;179424828 |
N2AB | 27036 | 81331;81332;81333 | chr2:178560103;178560102;178560101 | chr2:179424830;179424829;179424828 |
N2A | 26109 | 78550;78551;78552 | chr2:178560103;178560102;178560101 | chr2:179424830;179424829;179424828 |
N2B | 19612 | 59059;59060;59061 | chr2:178560103;178560102;178560101 | chr2:179424830;179424829;179424828 |
Novex-1 | 19737 | 59434;59435;59436 | chr2:178560103;178560102;178560101 | chr2:179424830;179424829;179424828 |
Novex-2 | 19804 | 59635;59636;59637 | chr2:178560103;178560102;178560101 | chr2:179424830;179424829;179424828 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1553561985 | None | 0.983 | N | 0.585 | 0.396 | 0.61589852972 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9597 | likely_pathogenic | 0.9157 | pathogenic | -1.048 | Destabilizing | 0.916 | D | 0.467 | neutral | None | None | None | None | I |
F/C | 0.8944 | likely_pathogenic | 0.8129 | pathogenic | -0.34 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.469021246 | None | None | I |
F/D | 0.9798 | likely_pathogenic | 0.9636 | pathogenic | 0.917 | Stabilizing | 0.996 | D | 0.649 | neutral | None | None | None | None | I |
F/E | 0.9837 | likely_pathogenic | 0.9713 | pathogenic | 0.899 | Stabilizing | 0.987 | D | 0.651 | neutral | None | None | None | None | I |
F/G | 0.9736 | likely_pathogenic | 0.9546 | pathogenic | -1.246 | Destabilizing | 0.987 | D | 0.631 | neutral | None | None | None | None | I |
F/H | 0.8526 | likely_pathogenic | 0.7854 | pathogenic | 0.179 | Stabilizing | 0.975 | D | 0.549 | neutral | None | None | None | None | I |
F/I | 0.9213 | likely_pathogenic | 0.8321 | pathogenic | -0.544 | Destabilizing | 0.967 | D | 0.484 | neutral | N | 0.463398932 | None | None | I |
F/K | 0.9775 | likely_pathogenic | 0.9691 | pathogenic | -0.073 | Destabilizing | 0.987 | D | 0.654 | neutral | None | None | None | None | I |
F/L | 0.9905 | likely_pathogenic | 0.9807 | pathogenic | -0.544 | Destabilizing | 0.805 | D | 0.453 | neutral | N | 0.477648113 | None | None | I |
F/M | 0.9365 | likely_pathogenic | 0.8863 | pathogenic | -0.361 | Destabilizing | 0.999 | D | 0.512 | neutral | None | None | None | None | I |
F/N | 0.9399 | likely_pathogenic | 0.8889 | pathogenic | 0.007 | Stabilizing | 0.987 | D | 0.657 | neutral | None | None | None | None | I |
F/P | 0.9987 | likely_pathogenic | 0.9982 | pathogenic | -0.692 | Destabilizing | 0.996 | D | 0.644 | neutral | None | None | None | None | I |
F/Q | 0.9583 | likely_pathogenic | 0.9324 | pathogenic | -0.07 | Destabilizing | 0.987 | D | 0.647 | neutral | None | None | None | None | I |
F/R | 0.9386 | likely_pathogenic | 0.9181 | pathogenic | 0.423 | Stabilizing | 0.987 | D | 0.651 | neutral | None | None | None | None | I |
F/S | 0.9101 | likely_pathogenic | 0.8036 | pathogenic | -0.746 | Destabilizing | 0.983 | D | 0.585 | neutral | N | 0.448037282 | None | None | I |
F/T | 0.9439 | likely_pathogenic | 0.8893 | pathogenic | -0.675 | Destabilizing | 0.987 | D | 0.589 | neutral | None | None | None | None | I |
F/V | 0.9053 | likely_pathogenic | 0.8078 | pathogenic | -0.692 | Destabilizing | 0.892 | D | 0.516 | neutral | N | 0.507354944 | None | None | I |
F/W | 0.7689 | likely_pathogenic | 0.7087 | pathogenic | -0.259 | Destabilizing | 0.997 | D | 0.502 | neutral | None | None | None | None | I |
F/Y | 0.2874 | likely_benign | 0.2398 | benign | -0.242 | Destabilizing | 0.025 | N | 0.28 | neutral | N | 0.426451288 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.