Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28684 | 86275;86276;86277 | chr2:178560082;178560081;178560080 | chr2:179424809;179424808;179424807 |
N2AB | 27043 | 81352;81353;81354 | chr2:178560082;178560081;178560080 | chr2:179424809;179424808;179424807 |
N2A | 26116 | 78571;78572;78573 | chr2:178560082;178560081;178560080 | chr2:179424809;179424808;179424807 |
N2B | 19619 | 59080;59081;59082 | chr2:178560082;178560081;178560080 | chr2:179424809;179424808;179424807 |
Novex-1 | 19744 | 59455;59456;59457 | chr2:178560082;178560081;178560080 | chr2:179424809;179424808;179424807 |
Novex-2 | 19811 | 59656;59657;59658 | chr2:178560082;178560081;178560080 | chr2:179424809;179424808;179424807 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1703079044 | None | 0.032 | N | 0.312 | 0.145 | 0.263140351381 | gnomAD-4.0.0 | 1.36849E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31873E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0933 | likely_benign | 0.0928 | benign | -0.551 | Destabilizing | 0.489 | N | 0.524 | neutral | N | 0.494578829 | None | None | I |
T/C | 0.3388 | likely_benign | 0.3272 | benign | -0.318 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | I |
T/D | 0.4255 | ambiguous | 0.4344 | ambiguous | 0.218 | Stabilizing | 0.956 | D | 0.585 | neutral | None | None | None | None | I |
T/E | 0.3063 | likely_benign | 0.3093 | benign | 0.168 | Stabilizing | 0.956 | D | 0.588 | neutral | None | None | None | None | I |
T/F | 0.2039 | likely_benign | 0.2052 | benign | -0.842 | Destabilizing | 0.956 | D | 0.751 | deleterious | None | None | None | None | I |
T/G | 0.2529 | likely_benign | 0.2646 | benign | -0.736 | Destabilizing | 0.86 | D | 0.597 | neutral | None | None | None | None | I |
T/H | 0.2599 | likely_benign | 0.2538 | benign | -1.083 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | I |
T/I | 0.111 | likely_benign | 0.1075 | benign | -0.17 | Destabilizing | 0.032 | N | 0.312 | neutral | N | 0.512673124 | None | None | I |
T/K | 0.2268 | likely_benign | 0.2278 | benign | -0.497 | Destabilizing | 0.956 | D | 0.585 | neutral | None | None | None | None | I |
T/L | 0.0684 | likely_benign | 0.0687 | benign | -0.17 | Destabilizing | 0.514 | D | 0.517 | neutral | None | None | None | None | I |
T/M | 0.0766 | likely_benign | 0.0767 | benign | 0.074 | Stabilizing | 0.988 | D | 0.669 | neutral | None | None | None | None | I |
T/N | 0.1316 | likely_benign | 0.1359 | benign | -0.272 | Destabilizing | 0.942 | D | 0.559 | neutral | N | 0.490971205 | None | None | I |
T/P | 0.3742 | ambiguous | 0.3566 | ambiguous | -0.266 | Destabilizing | 0.971 | D | 0.678 | prob.neutral | N | 0.510342907 | None | None | I |
T/Q | 0.2286 | likely_benign | 0.2285 | benign | -0.493 | Destabilizing | 0.978 | D | 0.674 | neutral | None | None | None | None | I |
T/R | 0.1994 | likely_benign | 0.1923 | benign | -0.273 | Destabilizing | 0.978 | D | 0.678 | prob.neutral | None | None | None | None | I |
T/S | 0.1052 | likely_benign | 0.1105 | benign | -0.549 | Destabilizing | 0.153 | N | 0.32 | neutral | N | 0.517558869 | None | None | I |
T/V | 0.1043 | likely_benign | 0.1029 | benign | -0.266 | Destabilizing | 0.514 | D | 0.5 | neutral | None | None | None | None | I |
T/W | 0.5562 | ambiguous | 0.5434 | ambiguous | -0.787 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | I |
T/Y | 0.2865 | likely_benign | 0.2809 | benign | -0.541 | Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.