Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28688 | 86287;86288;86289 | chr2:178560070;178560069;178560068 | chr2:179424797;179424796;179424795 |
N2AB | 27047 | 81364;81365;81366 | chr2:178560070;178560069;178560068 | chr2:179424797;179424796;179424795 |
N2A | 26120 | 78583;78584;78585 | chr2:178560070;178560069;178560068 | chr2:179424797;179424796;179424795 |
N2B | 19623 | 59092;59093;59094 | chr2:178560070;178560069;178560068 | chr2:179424797;179424796;179424795 |
Novex-1 | 19748 | 59467;59468;59469 | chr2:178560070;178560069;178560068 | chr2:179424797;179424796;179424795 |
Novex-2 | 19815 | 59668;59669;59670 | chr2:178560070;178560069;178560068 | chr2:179424797;179424796;179424795 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.997 | N | 0.593 | 0.352 | 0.571828761226 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7004 | likely_pathogenic | 0.6584 | pathogenic | -2.124 | Highly Destabilizing | 0.999 | D | 0.591 | neutral | D | 0.552998149 | None | None | N |
V/C | 0.9614 | likely_pathogenic | 0.9526 | pathogenic | -1.57 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/D | 0.9981 | likely_pathogenic | 0.9979 | pathogenic | -3.057 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
V/E | 0.9926 | likely_pathogenic | 0.9919 | pathogenic | -2.708 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.553758618 | None | None | N |
V/F | 0.7774 | likely_pathogenic | 0.7325 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
V/G | 0.9395 | likely_pathogenic | 0.9259 | pathogenic | -2.77 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.553758618 | None | None | N |
V/H | 0.9973 | likely_pathogenic | 0.9965 | pathogenic | -2.812 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
V/I | 0.0805 | likely_benign | 0.0807 | benign | -0.233 | Destabilizing | 0.997 | D | 0.539 | neutral | N | 0.494396795 | None | None | N |
V/K | 0.9936 | likely_pathogenic | 0.9926 | pathogenic | -1.605 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
V/L | 0.3511 | ambiguous | 0.3529 | ambiguous | -0.233 | Destabilizing | 0.997 | D | 0.593 | neutral | N | 0.521452897 | None | None | N |
V/M | 0.4391 | ambiguous | 0.4178 | ambiguous | -0.608 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
V/N | 0.9929 | likely_pathogenic | 0.9918 | pathogenic | -2.372 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/P | 0.9935 | likely_pathogenic | 0.9917 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/Q | 0.9907 | likely_pathogenic | 0.9891 | pathogenic | -1.926 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/R | 0.9877 | likely_pathogenic | 0.9853 | pathogenic | -1.939 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
V/S | 0.963 | likely_pathogenic | 0.9553 | pathogenic | -2.868 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/T | 0.8207 | likely_pathogenic | 0.8025 | pathogenic | -2.34 | Highly Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
V/W | 0.9968 | likely_pathogenic | 0.9952 | pathogenic | -1.698 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/Y | 0.9855 | likely_pathogenic | 0.9802 | pathogenic | -1.37 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.