Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28695 | 86308;86309;86310 | chr2:178560049;178560048;178560047 | chr2:179424776;179424775;179424774 |
N2AB | 27054 | 81385;81386;81387 | chr2:178560049;178560048;178560047 | chr2:179424776;179424775;179424774 |
N2A | 26127 | 78604;78605;78606 | chr2:178560049;178560048;178560047 | chr2:179424776;179424775;179424774 |
N2B | 19630 | 59113;59114;59115 | chr2:178560049;178560048;178560047 | chr2:179424776;179424775;179424774 |
Novex-1 | 19755 | 59488;59489;59490 | chr2:178560049;178560048;178560047 | chr2:179424776;179424775;179424774 |
Novex-2 | 19822 | 59689;59690;59691 | chr2:178560049;178560048;178560047 | chr2:179424776;179424775;179424774 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs759939166 | 0.268 | 0.22 | N | 0.323 | 0.205 | 0.225902525712 | gnomAD-2.1.1 | 2.83E-05 | None | None | None | None | N | None | 0 | 2.03122E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/N | rs759939166 | 0.268 | 0.22 | N | 0.323 | 0.205 | 0.225902525712 | gnomAD-4.0.0 | 6.15827E-06 | None | None | None | None | N | None | 0 | 1.78899E-04 | None | 0 | 0 | None | 0 | 0 | 8.99455E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1322 | likely_benign | 0.1226 | benign | -0.248 | Destabilizing | 0.001 | N | 0.291 | neutral | N | 0.481941998 | None | None | N |
D/C | 0.4446 | ambiguous | 0.4118 | ambiguous | 0.223 | Stabilizing | 0.909 | D | 0.565 | neutral | None | None | None | None | N |
D/E | 0.0948 | likely_benign | 0.0892 | benign | -0.399 | Destabilizing | None | N | 0.175 | neutral | N | 0.428664874 | None | None | N |
D/F | 0.499 | ambiguous | 0.462 | ambiguous | -0.418 | Destabilizing | 0.726 | D | 0.517 | neutral | None | None | None | None | N |
D/G | 0.1295 | likely_benign | 0.1268 | benign | -0.449 | Destabilizing | 0.124 | N | 0.275 | neutral | N | 0.460987936 | None | None | N |
D/H | 0.2342 | likely_benign | 0.2237 | benign | -0.524 | Destabilizing | 0.667 | D | 0.336 | neutral | N | 0.470492957 | None | None | N |
D/I | 0.2648 | likely_benign | 0.2426 | benign | 0.232 | Stabilizing | 0.567 | D | 0.512 | neutral | None | None | None | None | N |
D/K | 0.2523 | likely_benign | 0.2409 | benign | 0.244 | Stabilizing | 0.157 | N | 0.259 | neutral | None | None | None | None | N |
D/L | 0.2917 | likely_benign | 0.2698 | benign | 0.232 | Stabilizing | 0.396 | N | 0.466 | neutral | None | None | None | None | N |
D/M | 0.415 | ambiguous | 0.3878 | ambiguous | 0.55 | Stabilizing | 0.968 | D | 0.531 | neutral | None | None | None | None | N |
D/N | 0.1032 | likely_benign | 0.0961 | benign | 0.097 | Stabilizing | 0.22 | N | 0.323 | neutral | N | 0.494100432 | None | None | N |
D/P | 0.743 | likely_pathogenic | 0.7323 | pathogenic | 0.095 | Stabilizing | 0.726 | D | 0.327 | neutral | None | None | None | None | N |
D/Q | 0.2057 | likely_benign | 0.1939 | benign | 0.101 | Stabilizing | 0.157 | N | 0.288 | neutral | None | None | None | None | N |
D/R | 0.3011 | likely_benign | 0.2889 | benign | 0.265 | Stabilizing | 0.396 | N | 0.415 | neutral | None | None | None | None | N |
D/S | 0.1052 | likely_benign | 0.1008 | benign | -0.039 | Destabilizing | 0.157 | N | 0.282 | neutral | None | None | None | None | N |
D/T | 0.1634 | likely_benign | 0.1507 | benign | 0.107 | Stabilizing | 0.272 | N | 0.315 | neutral | None | None | None | None | N |
D/V | 0.1699 | likely_benign | 0.1537 | benign | 0.095 | Stabilizing | 0.124 | N | 0.463 | neutral | N | 0.505434934 | None | None | N |
D/W | 0.8208 | likely_pathogenic | 0.8049 | pathogenic | -0.372 | Destabilizing | 0.968 | D | 0.618 | neutral | None | None | None | None | N |
D/Y | 0.2143 | likely_benign | 0.2003 | benign | -0.204 | Destabilizing | 0.859 | D | 0.517 | neutral | N | 0.482609731 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.