Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28720 | 86383;86384;86385 | chr2:178559974;178559973;178559972 | chr2:179424701;179424700;179424699 |
N2AB | 27079 | 81460;81461;81462 | chr2:178559974;178559973;178559972 | chr2:179424701;179424700;179424699 |
N2A | 26152 | 78679;78680;78681 | chr2:178559974;178559973;178559972 | chr2:179424701;179424700;179424699 |
N2B | 19655 | 59188;59189;59190 | chr2:178559974;178559973;178559972 | chr2:179424701;179424700;179424699 |
Novex-1 | 19780 | 59563;59564;59565 | chr2:178559974;178559973;178559972 | chr2:179424701;179424700;179424699 |
Novex-2 | 19847 | 59764;59765;59766 | chr2:178559974;178559973;178559972 | chr2:179424701;179424700;179424699 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 1.0 | N | 0.628 | 0.34 | 0.242244723065 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1368 | likely_benign | 0.1342 | benign | -1.011 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | D | 0.524927558 | None | None | N |
E/C | 0.8131 | likely_pathogenic | 0.8012 | pathogenic | -0.545 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/D | 0.2552 | likely_benign | 0.2652 | benign | -1.184 | Destabilizing | 0.999 | D | 0.471 | neutral | D | 0.523772765 | None | None | N |
E/F | 0.7891 | likely_pathogenic | 0.7802 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
E/G | 0.2299 | likely_benign | 0.2195 | benign | -1.429 | Destabilizing | 1.0 | D | 0.754 | deleterious | N | 0.48255096 | None | None | N |
E/H | 0.5118 | ambiguous | 0.4882 | ambiguous | -0.643 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
E/I | 0.3456 | ambiguous | 0.335 | benign | 0.151 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/K | 0.1408 | likely_benign | 0.1341 | benign | -0.903 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.50764852 | None | None | N |
E/L | 0.3979 | ambiguous | 0.3807 | ambiguous | 0.151 | Stabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
E/M | 0.4268 | ambiguous | 0.4156 | ambiguous | 0.726 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/N | 0.2994 | likely_benign | 0.3052 | benign | -1.391 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/P | 0.4919 | ambiguous | 0.4967 | ambiguous | -0.216 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/Q | 0.1188 | likely_benign | 0.1176 | benign | -1.194 | Destabilizing | 1.0 | D | 0.628 | neutral | N | 0.480328632 | None | None | N |
E/R | 0.2598 | likely_benign | 0.2424 | benign | -0.627 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/S | 0.2106 | likely_benign | 0.2022 | benign | -1.816 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
E/T | 0.2004 | likely_benign | 0.1882 | benign | -1.46 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/V | 0.1988 | likely_benign | 0.1948 | benign | -0.216 | Destabilizing | 1.0 | D | 0.79 | deleterious | N | 0.518617662 | None | None | N |
E/W | 0.9318 | likely_pathogenic | 0.9233 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
E/Y | 0.692 | likely_pathogenic | 0.6754 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.